Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HLA-DPB1P04440 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
HLA-DPB1P04440 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.51■□□□□ 0.39
HLA-DPB1P04440 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
HLA-DPB1P04440 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HLA-DPB1P04440 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
HLA-DPB1P04440 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HLA-DPB1P04440 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
HLA-DPB1P04440 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC17.51■□□□□ 0.39
HLA-DPB1P04440 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HLA-DPB1P04440 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
HLA-DPB1P04440 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.51■□□□□ 0.39
HLA-DPB1P04440 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC17.51■□□□□ 0.39
HLA-DPB1P04440 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.51■□□□□ 0.39
HLA-DPB1P04440 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
HLA-DPB1P04440 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
HLA-DPB1P04440 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HLA-DPB1P04440 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HLA-DPB1P04440 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HLA-DPB1P04440 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HLA-DPB1P04440 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HLA-DPB1P04440 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC17.51■□□□□ 0.39
HLA-DPB1P04440 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HLA-DPB1P04440 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.5■□□□□ 0.39
HLA-DPB1P04440 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
HLA-DPB1P04440 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
HLA-DPB1P04440 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
HLA-DPB1P04440 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.5■□□□□ 0.39
HLA-DPB1P04440 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DPB1P04440 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DPB1P04440 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DPB1P04440 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DPB1P04440 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.5■□□□□ 0.39
HLA-DPB1P04440 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.5■□□□□ 0.39
HLA-DPB1P04440 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DPB1P04440 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DPB1P04440 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DPB1P04440 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC17.5■□□□□ 0.39
HLA-DPB1P04440 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DPB1P04440 CYP2T1P-201ENST00000432607 1285 ntBASIC17.5■□□□□ 0.39
HLA-DPB1P04440 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.5■□□□□ 0.39
HLA-DPB1P04440 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.5■□□□□ 0.39
HLA-DPB1P04440 AC026185.1-201ENST00000445748 174 ntBASIC17.5■□□□□ 0.39
HLA-DPB1P04440 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC17.5■□□□□ 0.39
HLA-DPB1P04440 CASP6-205ENST00000505486 538 ntTSL 4 BASIC17.5■□□□□ 0.39
HLA-DPB1P04440 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DPB1P04440 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC17.5■□□□□ 0.39
HLA-DPB1P04440 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC17.5■□□□□ 0.39
HLA-DPB1P04440 AC005181.1-201ENST00000604782 1256 ntBASIC17.5■□□□□ 0.39
HLA-DPB1P04440 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
HLA-DPB1P04440 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DPB1P04440 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
HLA-DPB1P04440 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DPB1P04440 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DPB1P04440 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DPB1P04440 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DPB1P04440 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DPB1P04440 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
HLA-DPB1P04440 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
HLA-DPB1P04440 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DPB1P04440 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DPB1P04440 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DPB1P04440 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DPB1P04440 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DPB1P04440 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DPB1P04440 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.5■□□□□ 0.39
HLA-DPB1P04440 AC079598.2-202ENST00000546624 1451 ntBASIC17.5■□□□□ 0.39
HLA-DPB1P04440 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
HLA-DPB1P04440 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.49■□□□□ 0.39
HLA-DPB1P04440 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DPB1P04440 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.49■□□□□ 0.39
HLA-DPB1P04440 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.49■□□□□ 0.39
HLA-DPB1P04440 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.49■□□□□ 0.39
HLA-DPB1P04440 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DPB1P04440 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DPB1P04440 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DPB1P04440 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DPB1P04440 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC17.49■□□□□ 0.39
HLA-DPB1P04440 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC17.49■□□□□ 0.39
HLA-DPB1P04440 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DPB1P04440 PBX1-209ENST00000485769 834 ntTSL 2 BASIC17.49■□□□□ 0.39
HLA-DPB1P04440 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC17.49■□□□□ 0.39
HLA-DPB1P04440 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC17.49■□□□□ 0.39
HLA-DPB1P04440 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.49■□□□□ 0.39
HLA-DPB1P04440 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.49■□□□□ 0.39
HLA-DPB1P04440 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DPB1P04440 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DPB1P04440 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.49■□□□□ 0.39
HLA-DPB1P04440 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
HLA-DPB1P04440 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DPB1P04440 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.49■□□□□ 0.39
HLA-DPB1P04440 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DPB1P04440 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DPB1P04440 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DPB1P04440 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
HLA-DPB1P04440 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DPB1P04440 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.48■□□□□ 0.39
HLA-DPB1P04440 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DPB1P04440 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DPB1P04440 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms