Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRGV3P03979 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRGV3P03979 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC15.35■□□□□ 0.05
TRGV3P03979 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRGV3P03979 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC15.35■□□□□ 0.05
TRGV3P03979 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRGV3P03979 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRGV3P03979 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC15.35■□□□□ 0.05
TRGV3P03979 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRGV3P03979 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRGV3P03979 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRGV3P03979 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRGV3P03979 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRGV3P03979 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
TRGV3P03979 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRGV3P03979 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRGV3P03979 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC15.34■□□□□ 0.05
TRGV3P03979 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRGV3P03979 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRGV3P03979 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRGV3P03979 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
TRGV3P03979 ABHD17AP1-201ENST00000358206 933 ntBASIC15.34■□□□□ 0.05
TRGV3P03979 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRGV3P03979 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRGV3P03979 KRASP1-201ENST00000407852 552 ntBASIC15.34■□□□□ 0.05
TRGV3P03979 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC15.34■□□□□ 0.05
TRGV3P03979 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC15.34■□□□□ 0.05
TRGV3P03979 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRGV3P03979 RN7SL471P-201ENST00000580476 299 ntBASIC15.34■□□□□ 0.05
TRGV3P03979 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC15.34■□□□□ 0.05
TRGV3P03979 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRGV3P03979 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC15.34■□□□□ 0.05
TRGV3P03979 MMD2-204ENST00000612910 778 ntTSL 5 BASIC15.34■□□□□ 0.05
TRGV3P03979 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRGV3P03979 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRGV3P03979 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC15.34■□□□□ 0.05
TRGV3P03979 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRGV3P03979 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
TRGV3P03979 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC15.34■□□□□ 0.05
TRGV3P03979 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRGV3P03979 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRGV3P03979 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC15.34■□□□□ 0.05
TRGV3P03979 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC15.34■□□□□ 0.05
TRGV3P03979 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRGV3P03979 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC15.34■□□□□ 0.05
TRGV3P03979 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
TRGV3P03979 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
TRGV3P03979 NBPF21P-201ENST00000425093 1451 ntBASIC15.33■□□□□ 0.05
TRGV3P03979 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC15.33■□□□□ 0.05
TRGV3P03979 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRGV3P03979 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
TRGV3P03979 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC15.33■□□□□ 0.05
TRGV3P03979 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRGV3P03979 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.05
TRGV3P03979 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC15.33■□□□□ 0.05
TRGV3P03979 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
TRGV3P03979 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRGV3P03979 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
TRGV3P03979 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRGV3P03979 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRGV3P03979 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
TRGV3P03979 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRGV3P03979 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRGV3P03979 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRGV3P03979 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC15.33■□□□□ 0.04
TRGV3P03979 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
TRGV3P03979 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC15.33■□□□□ 0.04
TRGV3P03979 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC15.33■□□□□ 0.04
TRGV3P03979 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRGV3P03979 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC15.33■□□□□ 0.04
TRGV3P03979 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRGV3P03979 FAM197Y4-202ENST00000622692 608 ntBASIC15.33■□□□□ 0.04
TRGV3P03979 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
TRGV3P03979 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
TRGV3P03979 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRGV3P03979 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
TRGV3P03979 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRGV3P03979 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
TRGV3P03979 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
TRGV3P03979 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRGV3P03979 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC15.33■□□□□ 0.04
TRGV3P03979 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRGV3P03979 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
TRGV3P03979 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
TRGV3P03979 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC15.32■□□□□ 0.04
TRGV3P03979 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRGV3P03979 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TRGV3P03979 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRGV3P03979 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRGV3P03979 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRGV3P03979 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC15.32■□□□□ 0.04
TRGV3P03979 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRGV3P03979 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC15.32■□□□□ 0.04
TRGV3P03979 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRGV3P03979 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC15.32■□□□□ 0.04
TRGV3P03979 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRGV3P03979 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC15.32■□□□□ 0.04
TRGV3P03979 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRGV3P03979 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC15.32■□□□□ 0.04
TRGV3P03979 YBX1P10-201ENST00000444752 975 ntBASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms