Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
MT-ND1P03886 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.38■□□□□ 0.53
MT-ND1P03886 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MT-ND1P03886 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
MT-ND1P03886 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
MT-ND1P03886 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MT-ND1P03886 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
MT-ND1P03886 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
MT-ND1P03886 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MT-ND1P03886 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MT-ND1P03886 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MT-ND1P03886 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MT-ND1P03886 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MT-ND1P03886 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MT-ND1P03886 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MT-ND1P03886 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
MT-ND1P03886 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MT-ND1P03886 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MT-ND1P03886 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MT-ND1P03886 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.37■□□□□ 0.53
MT-ND1P03886 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
MT-ND1P03886 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.37■□□□□ 0.53
MT-ND1P03886 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.37■□□□□ 0.53
MT-ND1P03886 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.37■□□□□ 0.53
MT-ND1P03886 AC087623.3-201ENST00000607047 1098 ntBASIC18.37■□□□□ 0.53
MT-ND1P03886 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.37■□□□□ 0.53
MT-ND1P03886 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MT-ND1P03886 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MT-ND1P03886 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
MT-ND1P03886 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MT-ND1P03886 FZD10-202ENST00000539839 3282 ntBASIC18.37■□□□□ 0.53
MT-ND1P03886 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
MT-ND1P03886 AL161938.1-201ENST00000569833 2180 ntBASIC18.37■□□□□ 0.53
MT-ND1P03886 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MT-ND1P03886 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MT-ND1P03886 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MT-ND1P03886 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
MT-ND1P03886 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
MT-ND1P03886 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MT-ND1P03886 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.36■□□□□ 0.53
MT-ND1P03886 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
MT-ND1P03886 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.36■□□□□ 0.53
MT-ND1P03886 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
MT-ND1P03886 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MT-ND1P03886 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.36■□□□□ 0.53
MT-ND1P03886 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
MT-ND1P03886 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.36■□□□□ 0.53
MT-ND1P03886 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.36■□□□□ 0.53
MT-ND1P03886 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MT-ND1P03886 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
MT-ND1P03886 KRT16P6-202ENST00000425692 1426 ntBASIC18.36■□□□□ 0.53
MT-ND1P03886 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.36■□□□□ 0.53
MT-ND1P03886 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.36■□□□□ 0.53
MT-ND1P03886 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.36■□□□□ 0.53
MT-ND1P03886 AL162412.1-201ENST00000567129 965 ntBASIC18.36■□□□□ 0.53
MT-ND1P03886 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
MT-ND1P03886 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
MT-ND1P03886 AP001271.2-201ENST00000624018 1556 ntBASIC18.36■□□□□ 0.53
MT-ND1P03886 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
MT-ND1P03886 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
MT-ND1P03886 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MT-ND1P03886 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.35■□□□□ 0.53
MT-ND1P03886 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
MT-ND1P03886 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.35■□□□□ 0.53
MT-ND1P03886 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
MT-ND1P03886 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MT-ND1P03886 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MT-ND1P03886 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MT-ND1P03886 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MT-ND1P03886 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MT-ND1P03886 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.35■□□□□ 0.53
MT-ND1P03886 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
MT-ND1P03886 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MT-ND1P03886 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MT-ND1P03886 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.35■□□□□ 0.53
MT-ND1P03886 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MT-ND1P03886 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.35■□□□□ 0.53
MT-ND1P03886 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.35■□□□□ 0.53
MT-ND1P03886 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.35■□□□□ 0.53
MT-ND1P03886 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MT-ND1P03886 AC007322.4-201ENST00000509611 723 ntBASIC18.35■□□□□ 0.53
MT-ND1P03886 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.35■□□□□ 0.53
MT-ND1P03886 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.35■□□□□ 0.53
MT-ND1P03886 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.35■□□□□ 0.53
MT-ND1P03886 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
MT-ND1P03886 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.35■□□□□ 0.53
MT-ND1P03886 AC013268.1-206ENST00000638368 961 ntBASIC18.35■□□□□ 0.53
MT-ND1P03886 AC112229.1-201ENST00000639295 961 ntBASIC18.35■□□□□ 0.53
MT-ND1P03886 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.35■□□□□ 0.53
MT-ND1P03886 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.35■□□□□ 0.53
MT-ND1P03886 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.35■□□□□ 0.53
MT-ND1P03886 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
MT-ND1P03886 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MT-ND1P03886 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
MT-ND1P03886 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
MT-ND1P03886 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MT-ND1P03886 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
MT-ND1P03886 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
MT-ND1P03886 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.34■□□□□ 0.53
MT-ND1P03886 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms