Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
APOC1P02654 AL050303.2-201ENST00000619798 666 ntBASIC17.22■□□□□ 0.35
APOC1P02654 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.22■□□□□ 0.35
APOC1P02654 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.22■□□□□ 0.35
APOC1P02654 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.22■□□□□ 0.35
APOC1P02654 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
APOC1P02654 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.22■□□□□ 0.35
APOC1P02654 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
APOC1P02654 TREX1-205ENST00000625293 1783 ntBASIC17.22■□□□□ 0.35
APOC1P02654 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
APOC1P02654 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.22■□□□□ 0.35
APOC1P02654 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
APOC1P02654 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
APOC1P02654 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
APOC1P02654 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.21■□□□□ 0.35
APOC1P02654 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.21■□□□□ 0.35
APOC1P02654 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
APOC1P02654 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
APOC1P02654 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
APOC1P02654 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
APOC1P02654 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
APOC1P02654 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
APOC1P02654 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
APOC1P02654 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
APOC1P02654 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.21■□□□□ 0.35
APOC1P02654 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
APOC1P02654 METTL15-202ENST00000403099 795 ntTSL 5 BASIC17.21■□□□□ 0.35
APOC1P02654 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
APOC1P02654 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.21■□□□□ 0.35
APOC1P02654 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC17.21■□□□□ 0.35
APOC1P02654 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.21■□□□□ 0.35
APOC1P02654 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC17.21■□□□□ 0.35
APOC1P02654 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.21■□□□□ 0.35
APOC1P02654 RAP2CP1-201ENST00000605103 478 ntBASIC17.21■□□□□ 0.35
APOC1P02654 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
APOC1P02654 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.21■□□□□ 0.35
APOC1P02654 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
APOC1P02654 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
APOC1P02654 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
APOC1P02654 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
APOC1P02654 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
APOC1P02654 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
APOC1P02654 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.2■□□□□ 0.34
APOC1P02654 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
APOC1P02654 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.2■□□□□ 0.34
APOC1P02654 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.2■□□□□ 0.34
APOC1P02654 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
APOC1P02654 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
APOC1P02654 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
APOC1P02654 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
APOC1P02654 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
APOC1P02654 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.2■□□□□ 0.34
APOC1P02654 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.2■□□□□ 0.34
APOC1P02654 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.2■□□□□ 0.34
APOC1P02654 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
APOC1P02654 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
APOC1P02654 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.2■□□□□ 0.34
APOC1P02654 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.2■□□□□ 0.34
APOC1P02654 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
APOC1P02654 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.2■□□□□ 0.34
APOC1P02654 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC17.2■□□□□ 0.34
APOC1P02654 AC083906.2-201ENST00000511578 360 ntBASIC17.2■□□□□ 0.34
APOC1P02654 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17.2■□□□□ 0.34
APOC1P02654 AC092118.2-201ENST00000613495 667 ntBASIC17.2■□□□□ 0.34
APOC1P02654 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
APOC1P02654 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
APOC1P02654 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
APOC1P02654 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
APOC1P02654 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.2■□□□□ 0.34
APOC1P02654 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
APOC1P02654 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.2■□□□□ 0.34
APOC1P02654 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
APOC1P02654 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
APOC1P02654 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
APOC1P02654 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
APOC1P02654 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
APOC1P02654 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.2■□□□□ 0.34
APOC1P02654 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.2■□□□□ 0.34
APOC1P02654 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
APOC1P02654 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
APOC1P02654 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.19■□□□□ 0.34
APOC1P02654 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
APOC1P02654 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
APOC1P02654 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.19■□□□□ 0.34
APOC1P02654 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
APOC1P02654 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
APOC1P02654 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.19■□□□□ 0.34
APOC1P02654 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.19■□□□□ 0.34
APOC1P02654 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
APOC1P02654 MIPEPP3-201ENST00000412105 444 ntBASIC17.19■□□□□ 0.34
APOC1P02654 CROCCP5-201ENST00000436658 830 ntBASIC17.19■□□□□ 0.34
APOC1P02654 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
APOC1P02654 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC17.19■□□□□ 0.34
APOC1P02654 AC005829.2-201ENST00000571422 1056 ntBASIC17.19■□□□□ 0.34
APOC1P02654 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
APOC1P02654 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
APOC1P02654 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
APOC1P02654 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
APOC1P02654 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.19■□□□□ 0.34
APOC1P02654 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms