Protein–RNA interactions for Protein: O95714

HERC2, E3 ubiquitin-protein ligase HERC2, humanhuman

Predictions only

Length 4,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2O95714 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
HERC2O95714 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC12.16□□□□□ -0.46
HERC2O95714 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
HERC2O95714 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
HERC2O95714 ST7-205ENST00000393446 2114 ntTSL 5 BASIC12.16□□□□□ -0.46
HERC2O95714 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC12.16□□□□□ -0.46
HERC2O95714 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HERC2O95714 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
HERC2O95714 CNN2P11-201ENST00000429351 262 ntBASIC12.16□□□□□ -0.46
HERC2O95714 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC12.16□□□□□ -0.46
HERC2O95714 STX5-203ENST00000394690 1568 ntTSL 5 BASIC12.15□□□□□ -0.46
HERC2O95714 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HERC2O95714 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
HERC2O95714 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
HERC2O95714 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
HERC2O95714 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HERC2O95714 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
HERC2O95714 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HERC2O95714 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HERC2O95714 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC12.15□□□□□ -0.46
HERC2O95714 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
HERC2O95714 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
HERC2O95714 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC12.15□□□□□ -0.46
HERC2O95714 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HERC2O95714 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC12.15□□□□□ -0.46
HERC2O95714 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HERC2O95714 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC12.15□□□□□ -0.46
HERC2O95714 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC12.15□□□□□ -0.46
HERC2O95714 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC12.15□□□□□ -0.46
HERC2O95714 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HERC2O95714 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
HERC2O95714 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
HERC2O95714 CALM3-202ENST00000391918 702 ntTSL 2 BASIC12.15□□□□□ -0.46
HERC2O95714 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HERC2O95714 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HERC2O95714 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
HERC2O95714 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HERC2O95714 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HERC2O95714 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HERC2O95714 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HERC2O95714 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HERC2O95714 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
HERC2O95714 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
HERC2O95714 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC12.14□□□□□ -0.47
HERC2O95714 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC12.14□□□□□ -0.47
HERC2O95714 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC12.14□□□□□ -0.47
HERC2O95714 AL008721.1-201ENST00000609964 604 ntBASIC12.14□□□□□ -0.47
HERC2O95714 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HERC2O95714 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HERC2O95714 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
HERC2O95714 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC12.14□□□□□ -0.47
HERC2O95714 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
HERC2O95714 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
HERC2O95714 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
HERC2O95714 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC12.14□□□□□ -0.47
HERC2O95714 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC12.14□□□□□ -0.47
HERC2O95714 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HERC2O95714 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HERC2O95714 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
HERC2O95714 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC12.14□□□□□ -0.47
HERC2O95714 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
HERC2O95714 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HERC2O95714 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
HERC2O95714 RPS2P1-201ENST00000434010 821 ntBASIC12.14□□□□□ -0.47
HERC2O95714 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HERC2O95714 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
HERC2O95714 SIGLEC30P-201ENST00000455569 941 ntBASIC12.14□□□□□ -0.47
HERC2O95714 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC12.14□□□□□ -0.47
HERC2O95714 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC12.14□□□□□ -0.47
HERC2O95714 AC005225.4-201ENST00000557330 545 ntBASIC12.14□□□□□ -0.47
HERC2O95714 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC12.14□□□□□ -0.47
HERC2O95714 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
HERC2O95714 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
HERC2O95714 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
HERC2O95714 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
HERC2O95714 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
HERC2O95714 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC12.13□□□□□ -0.47
HERC2O95714 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC12.13□□□□□ -0.47
HERC2O95714 AC084346.2-201ENST00000607097 949 ntBASIC12.13□□□□□ -0.47
HERC2O95714 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
HERC2O95714 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
HERC2O95714 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC12.13□□□□□ -0.47
HERC2O95714 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
HERC2O95714 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
HERC2O95714 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
HERC2O95714 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
HERC2O95714 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
HERC2O95714 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
HERC2O95714 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
HERC2O95714 HNRNPDP1-201ENST00000439535 754 ntBASIC12.13□□□□□ -0.47
HERC2O95714 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC12.13□□□□□ -0.47
HERC2O95714 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
HERC2O95714 AC116407.3-201ENST00000623905 1129 ntBASIC12.13□□□□□ -0.47
HERC2O95714 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
HERC2O95714 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
HERC2O95714 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC12.13□□□□□ -0.47
HERC2O95714 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
HERC2O95714 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
HERC2O95714 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC12.13□□□□□ -0.47
HERC2O95714 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC12.13□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms