Protein–RNA interactions for Protein: O95521

PRAMEF1, PRAME family member 1, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF1O95521 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
PRAMEF1O95521 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
PRAMEF1O95521 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRAMEF1O95521 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRAMEF1O95521 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRAMEF1O95521 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
PRAMEF1O95521 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRAMEF1O95521 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
PRAMEF1O95521 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRAMEF1O95521 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRAMEF1O95521 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PRAMEF1O95521 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.42■□□□□ 0.7
PRAMEF1O95521 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.42■□□□□ 0.7
PRAMEF1O95521 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.42■□□□□ 0.7
PRAMEF1O95521 AL359736.2-201ENST00000621992 437 ntBASIC19.42■□□□□ 0.7
PRAMEF1O95521 FAM197Y4-202ENST00000622692 608 ntBASIC19.42■□□□□ 0.7
PRAMEF1O95521 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
PRAMEF1O95521 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRAMEF1O95521 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRAMEF1O95521 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PRAMEF1O95521 KRT8P8-201ENST00000434750 1448 ntBASIC19.42■□□□□ 0.7
PRAMEF1O95521 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.42■□□□□ 0.7
PRAMEF1O95521 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PRAMEF1O95521 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRAMEF1O95521 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PRAMEF1O95521 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.41■□□□□ 0.7
PRAMEF1O95521 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRAMEF1O95521 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.41■□□□□ 0.7
PRAMEF1O95521 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRAMEF1O95521 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
PRAMEF1O95521 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRAMEF1O95521 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PRAMEF1O95521 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PRAMEF1O95521 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
PRAMEF1O95521 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.41■□□□□ 0.7
PRAMEF1O95521 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.41■□□□□ 0.7
PRAMEF1O95521 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.41■□□□□ 0.7
PRAMEF1O95521 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
PRAMEF1O95521 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.41■□□□□ 0.7
PRAMEF1O95521 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PRAMEF1O95521 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRAMEF1O95521 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.41■□□□□ 0.7
PRAMEF1O95521 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRAMEF1O95521 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRAMEF1O95521 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PRAMEF1O95521 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRAMEF1O95521 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRAMEF1O95521 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRAMEF1O95521 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRAMEF1O95521 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PRAMEF1O95521 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRAMEF1O95521 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
PRAMEF1O95521 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
PRAMEF1O95521 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
PRAMEF1O95521 KRT16P5-201ENST00000455284 522 ntBASIC19.4■□□□□ 0.7
PRAMEF1O95521 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.4■□□□□ 0.7
PRAMEF1O95521 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.4■□□□□ 0.7
PRAMEF1O95521 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
PRAMEF1O95521 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRAMEF1O95521 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
PRAMEF1O95521 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRAMEF1O95521 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRAMEF1O95521 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRAMEF1O95521 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.4■□□□□ 0.7
PRAMEF1O95521 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRAMEF1O95521 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.39■□□□□ 0.7
PRAMEF1O95521 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
PRAMEF1O95521 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
PRAMEF1O95521 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
PRAMEF1O95521 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PRAMEF1O95521 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRAMEF1O95521 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.39■□□□□ 0.69
PRAMEF1O95521 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.39■□□□□ 0.69
PRAMEF1O95521 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.39■□□□□ 0.69
PRAMEF1O95521 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.39■□□□□ 0.69
PRAMEF1O95521 GCSHP5-201ENST00000443090 522 ntBASIC19.39■□□□□ 0.69
PRAMEF1O95521 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PRAMEF1O95521 AC142381.4-202ENST00000563973 229 ntBASIC19.39■□□□□ 0.69
PRAMEF1O95521 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PRAMEF1O95521 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.39■□□□□ 0.69
PRAMEF1O95521 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PRAMEF1O95521 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.39■□□□□ 0.69
PRAMEF1O95521 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRAMEF1O95521 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRAMEF1O95521 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRAMEF1O95521 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRAMEF1O95521 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRAMEF1O95521 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
PRAMEF1O95521 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRAMEF1O95521 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
PRAMEF1O95521 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRAMEF1O95521 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRAMEF1O95521 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRAMEF1O95521 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PRAMEF1O95521 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRAMEF1O95521 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRAMEF1O95521 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PRAMEF1O95521 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PRAMEF1O95521 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.38■□□□□ 0.69
PRAMEF1O95521 AL158047.1-201ENST00000445918 881 ntBASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms