Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.32■□□□□ 0.2
SIX6O95475 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SIX6O95475 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.32■□□□□ 0.2
SIX6O95475 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC16.32■□□□□ 0.2
SIX6O95475 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SIX6O95475 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SIX6O95475 AL356740.2-201ENST00000601559 647 ntBASIC16.32■□□□□ 0.2
SIX6O95475 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC16.32■□□□□ 0.2
SIX6O95475 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
SIX6O95475 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.32■□□□□ 0.2
SIX6O95475 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
SIX6O95475 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SIX6O95475 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
SIX6O95475 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SIX6O95475 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.32■□□□□ 0.2
SIX6O95475 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SIX6O95475 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.31■□□□□ 0.2
SIX6O95475 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SIX6O95475 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SIX6O95475 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SIX6O95475 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SIX6O95475 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SIX6O95475 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.31■□□□□ 0.2
SIX6O95475 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SIX6O95475 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SIX6O95475 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SIX6O95475 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SIX6O95475 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SIX6O95475 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC16.31■□□□□ 0.2
SIX6O95475 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.31■□□□□ 0.2
SIX6O95475 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SIX6O95475 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC16.31■□□□□ 0.2
SIX6O95475 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC16.31■□□□□ 0.2
SIX6O95475 AC008175.2-201ENST00000612840 297 ntBASIC16.31■□□□□ 0.2
SIX6O95475 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SIX6O95475 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SIX6O95475 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SIX6O95475 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SIX6O95475 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SIX6O95475 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC16.31■□□□□ 0.2
SIX6O95475 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.31■□□□□ 0.2
SIX6O95475 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SIX6O95475 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SIX6O95475 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SIX6O95475 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.31■□□□□ 0.2
SIX6O95475 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SIX6O95475 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SIX6O95475 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SIX6O95475 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SIX6O95475 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SIX6O95475 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SIX6O95475 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SIX6O95475 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SIX6O95475 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SIX6O95475 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SIX6O95475 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.3■□□□□ 0.2
SIX6O95475 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC16.3■□□□□ 0.2
SIX6O95475 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SIX6O95475 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SIX6O95475 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC16.3■□□□□ 0.2
SIX6O95475 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
SIX6O95475 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
SIX6O95475 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC16.3■□□□□ 0.2
SIX6O95475 POU5F1P4-201ENST00000413175 1085 ntBASIC16.3■□□□□ 0.2
SIX6O95475 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
SIX6O95475 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC16.3■□□□□ 0.2
SIX6O95475 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SIX6O95475 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SIX6O95475 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC16.3■□□□□ 0.2
SIX6O95475 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SIX6O95475 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.3■□□□□ 0.2
SIX6O95475 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SIX6O95475 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SIX6O95475 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SIX6O95475 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.29■□□□□ 0.2
SIX6O95475 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SIX6O95475 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SIX6O95475 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SIX6O95475 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SIX6O95475 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.29■□□□□ 0.2
SIX6O95475 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
SIX6O95475 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC16.29■□□□□ 0.2
SIX6O95475 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SIX6O95475 AL031598.1-201ENST00000561511 1773 ntBASIC16.29■□□□□ 0.2
SIX6O95475 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SIX6O95475 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SIX6O95475 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SIX6O95475 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.29■□□□□ 0.2
SIX6O95475 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.29■□□□□ 0.2
SIX6O95475 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
SIX6O95475 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SIX6O95475 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SIX6O95475 AC011298.3-201ENST00000615796 283 ntBASIC16.29■□□□□ 0.2
SIX6O95475 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
SIX6O95475 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.29■□□□□ 0.2
SIX6O95475 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC16.29■□□□□ 0.2
SIX6O95475 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SIX6O95475 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SIX6O95475 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.29■□□□□ 0.2
SIX6O95475 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms