Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SCAF4O95104 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
SCAF4O95104 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
SCAF4O95104 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
SCAF4O95104 AL138781.2-201ENST00000617896 1843 ntBASIC15.94■□□□□ 0.14
SCAF4O95104 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
SCAF4O95104 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC15.94■□□□□ 0.14
SCAF4O95104 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC15.94■□□□□ 0.14
SCAF4O95104 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SCAF4O95104 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SCAF4O95104 SAPCD2P1-201ENST00000395413 1184 ntBASIC15.94■□□□□ 0.14
SCAF4O95104 AC016769.1-201ENST00000409132 1010 ntBASIC15.94■□□□□ 0.14
SCAF4O95104 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC15.94■□□□□ 0.14
SCAF4O95104 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC15.94■□□□□ 0.14
SCAF4O95104 AC137761.2-201ENST00000561729 223 ntBASIC15.94■□□□□ 0.14
SCAF4O95104 AC145350.3-201ENST00000569033 163 ntBASIC15.94■□□□□ 0.14
SCAF4O95104 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC15.94■□□□□ 0.14
SCAF4O95104 AC243732.1-201ENST00000612648 864 ntBASIC15.94■□□□□ 0.14
SCAF4O95104 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC15.94■□□□□ 0.14
SCAF4O95104 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
SCAF4O95104 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SCAF4O95104 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SCAF4O95104 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SCAF4O95104 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC15.94■□□□□ 0.14
SCAF4O95104 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SCAF4O95104 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SCAF4O95104 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SCAF4O95104 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SCAF4O95104 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SCAF4O95104 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
SCAF4O95104 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SCAF4O95104 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
SCAF4O95104 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SCAF4O95104 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC15.94■□□□□ 0.14
SCAF4O95104 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
SCAF4O95104 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SCAF4O95104 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
SCAF4O95104 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SCAF4O95104 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SCAF4O95104 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SCAF4O95104 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC15.93■□□□□ 0.14
SCAF4O95104 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
SCAF4O95104 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC15.93■□□□□ 0.14
SCAF4O95104 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
SCAF4O95104 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SCAF4O95104 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC15.93■□□□□ 0.14
SCAF4O95104 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SCAF4O95104 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC15.93■□□□□ 0.14
SCAF4O95104 DBI-210ENST00000542275 757 ntTSL 5 BASIC15.93■□□□□ 0.14
SCAF4O95104 AC022517.1-201ENST00000592429 346 ntBASIC15.93■□□□□ 0.14
SCAF4O95104 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
SCAF4O95104 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SCAF4O95104 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
SCAF4O95104 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SCAF4O95104 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
SCAF4O95104 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
SCAF4O95104 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SCAF4O95104 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
SCAF4O95104 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
SCAF4O95104 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
SCAF4O95104 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC15.93■□□□□ 0.14
SCAF4O95104 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
SCAF4O95104 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SCAF4O95104 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SCAF4O95104 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SCAF4O95104 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SCAF4O95104 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
SCAF4O95104 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SCAF4O95104 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC15.92■□□□□ 0.14
SCAF4O95104 AC079598.2-202ENST00000546624 1451 ntBASIC15.92■□□□□ 0.14
SCAF4O95104 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SCAF4O95104 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
SCAF4O95104 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
SCAF4O95104 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
SCAF4O95104 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SCAF4O95104 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SCAF4O95104 NAA20-201ENST00000310450 920 ntTSL 2 BASIC15.92■□□□□ 0.14
SCAF4O95104 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC15.92■□□□□ 0.14
SCAF4O95104 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SCAF4O95104 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
SCAF4O95104 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC15.92■□□□□ 0.14
SCAF4O95104 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC15.92■□□□□ 0.14
SCAF4O95104 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC15.92■□□□□ 0.14
SCAF4O95104 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC15.92■□□□□ 0.14
SCAF4O95104 AP001160.3-201ENST00000601484 763 ntBASIC15.92■□□□□ 0.14
SCAF4O95104 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC15.92■□□□□ 0.14
SCAF4O95104 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SCAF4O95104 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SCAF4O95104 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SCAF4O95104 PTGES2-AS1-201ENST00000443493 2100 ntBASIC15.92■□□□□ 0.14
SCAF4O95104 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SCAF4O95104 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SCAF4O95104 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SCAF4O95104 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC15.92■□□□□ 0.14
SCAF4O95104 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SCAF4O95104 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
SCAF4O95104 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SCAF4O95104 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SCAF4O95104 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC15.92■□□□□ 0.14
SCAF4O95104 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms