Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC8.75□□□□□ -1.01
USH2AO75445 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC8.74□□□□□ -1.01
USH2AO75445 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC8.74□□□□□ -1.01
USH2AO75445 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
USH2AO75445 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
USH2AO75445 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
USH2AO75445 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
USH2AO75445 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
USH2AO75445 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC8.74□□□□□ -1.01
USH2AO75445 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC8.74□□□□□ -1.01
USH2AO75445 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC8.74□□□□□ -1.01
USH2AO75445 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
USH2AO75445 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
USH2AO75445 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
USH2AO75445 TLE1-202ENST00000376484 666 ntTSL 3 BASIC8.74□□□□□ -1.01
USH2AO75445 HLA-G-202ENST00000376815 851 ntBASIC8.74□□□□□ -1.01
USH2AO75445 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
USH2AO75445 KRT18P58-201ENST00000527480 1120 ntBASIC8.74□□□□□ -1.01
USH2AO75445 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC8.74□□□□□ -1.01
USH2AO75445 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC8.74□□□□□ -1.01
USH2AO75445 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC8.74□□□□□ -1.01
USH2AO75445 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC8.74□□□□□ -1.01
USH2AO75445 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC8.74□□□□□ -1.01
USH2AO75445 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
USH2AO75445 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
USH2AO75445 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
USH2AO75445 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
USH2AO75445 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC8.74□□□□□ -1.01
USH2AO75445 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC8.74□□□□□ -1.01
USH2AO75445 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
USH2AO75445 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC8.74□□□□□ -1.01
USH2AO75445 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
USH2AO75445 CASK-201ENST00000378154 2494 ntTSL 5 BASIC8.74□□□□□ -1.01
USH2AO75445 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC8.74□□□□□ -1.01
USH2AO75445 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
USH2AO75445 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC8.74□□□□□ -1.01
USH2AO75445 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
USH2AO75445 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
USH2AO75445 HES2-202ENST00000377836 507 ntTSL 2 BASIC8.74□□□□□ -1.01
USH2AO75445 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC8.74□□□□□ -1.01
USH2AO75445 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC8.74□□□□□ -1.01
USH2AO75445 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
USH2AO75445 AC104819.1-201ENST00000504587 486 ntBASIC8.74□□□□□ -1.01
USH2AO75445 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
USH2AO75445 AL121772.3-201ENST00000610840 674 ntBASIC8.74□□□□□ -1.01
USH2AO75445 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC8.74□□□□□ -1.01
USH2AO75445 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC8.74□□□□□ -1.01
USH2AO75445 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
USH2AO75445 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
USH2AO75445 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
USH2AO75445 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC8.73□□□□□ -1.01
USH2AO75445 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
USH2AO75445 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC8.73□□□□□ -1.01
USH2AO75445 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC8.73□□□□□ -1.01
USH2AO75445 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC8.73□□□□□ -1.01
USH2AO75445 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
USH2AO75445 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
USH2AO75445 PMS2P7-201ENST00000506558 1336 ntBASIC8.73□□□□□ -1.01
USH2AO75445 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
USH2AO75445 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
USH2AO75445 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
USH2AO75445 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
USH2AO75445 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
USH2AO75445 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
USH2AO75445 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
USH2AO75445 FAM8A3P-201ENST00000427218 844 ntBASIC8.73□□□□□ -1.01
USH2AO75445 PTPA-216ENST00000432651 857 ntTSL 2 BASIC8.73□□□□□ -1.01
USH2AO75445 KRT18P67-201ENST00000432816 1264 ntBASIC8.73□□□□□ -1.01
USH2AO75445 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
USH2AO75445 AP005901.3-202ENST00000581653 237 ntBASIC8.73□□□□□ -1.01
USH2AO75445 IGHV3OR16-7-201ENST00000604106 360 ntBASIC8.73□□□□□ -1.01
USH2AO75445 LINC01465-201ENST00000408887 1940 ntBASIC8.73□□□□□ -1.01
USH2AO75445 AC127496.7-201ENST00000625110 1798 ntBASIC8.73□□□□□ -1.01
USH2AO75445 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC8.73□□□□□ -1.01
USH2AO75445 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
USH2AO75445 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC8.73□□□□□ -1.01
USH2AO75445 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
USH2AO75445 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC8.73□□□□□ -1.01
USH2AO75445 TFP1-202ENST00000475455 1573 ntBASIC8.73□□□□□ -1.01
USH2AO75445 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC8.73□□□□□ -1.01
USH2AO75445 NMU-202ENST00000505262 693 ntTSL 3 BASIC8.73□□□□□ -1.01
USH2AO75445 CIB2-208ENST00000560618 804 ntTSL 2 BASIC8.73□□□□□ -1.01
USH2AO75445 PIN1-206ENST00000587625 878 ntTSL 2 BASIC8.73□□□□□ -1.01
USH2AO75445 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC8.73□□□□□ -1.01
USH2AO75445 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC8.73□□□□□ -1.01
USH2AO75445 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC8.73□□□□□ -1.01
USH2AO75445 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
USH2AO75445 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
USH2AO75445 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
USH2AO75445 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC8.73□□□□□ -1.01
USH2AO75445 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
USH2AO75445 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC8.73□□□□□ -1.01
USH2AO75445 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
USH2AO75445 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
USH2AO75445 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
USH2AO75445 PNN-202ENST00000553331 656 ntTSL 3 BASIC8.73□□□□□ -1.01
USH2AO75445 AC064862.7-201ENST00000604520 867 ntBASIC8.73□□□□□ -1.01
USH2AO75445 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
USH2AO75445 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
USH2AO75445 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC8.73□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms