Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM3O75382 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM3O75382 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.16■□□□□ 0.5
TRIM3O75382 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.16■□□□□ 0.5
TRIM3O75382 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
TRIM3O75382 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.16■□□□□ 0.5
TRIM3O75382 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.16■□□□□ 0.5
TRIM3O75382 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.16■□□□□ 0.5
TRIM3O75382 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.16■□□□□ 0.5
TRIM3O75382 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.16■□□□□ 0.5
TRIM3O75382 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM3O75382 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.16■□□□□ 0.5
TRIM3O75382 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM3O75382 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM3O75382 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM3O75382 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM3O75382 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.16■□□□□ 0.5
TRIM3O75382 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
TRIM3O75382 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.15■□□□□ 0.5
TRIM3O75382 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.15■□□□□ 0.5
TRIM3O75382 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.15■□□□□ 0.5
TRIM3O75382 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
TRIM3O75382 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM3O75382 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM3O75382 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM3O75382 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.15■□□□□ 0.5
TRIM3O75382 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.15■□□□□ 0.5
TRIM3O75382 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM3O75382 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM3O75382 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM3O75382 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM3O75382 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.15■□□□□ 0.5
TRIM3O75382 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.15■□□□□ 0.5
TRIM3O75382 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.15■□□□□ 0.5
TRIM3O75382 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.15■□□□□ 0.5
TRIM3O75382 UBE2SP1-201ENST00000450587 669 ntBASIC18.15■□□□□ 0.5
TRIM3O75382 AC133681.1-201ENST00000465482 601 ntBASIC18.15■□□□□ 0.5
TRIM3O75382 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.15■□□□□ 0.5
TRIM3O75382 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
TRIM3O75382 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
TRIM3O75382 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.15■□□□□ 0.5
TRIM3O75382 AL023875.1-201ENST00000640777 796 ntBASIC18.15■□□□□ 0.5
TRIM3O75382 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
TRIM3O75382 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.15■□□□□ 0.5
TRIM3O75382 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM3O75382 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.15■□□□□ 0.5
TRIM3O75382 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM3O75382 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.15■□□□□ 0.5
TRIM3O75382 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM3O75382 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
TRIM3O75382 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
TRIM3O75382 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
TRIM3O75382 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM3O75382 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM3O75382 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM3O75382 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.15■□□□□ 0.5
TRIM3O75382 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM3O75382 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.15■□□□□ 0.5
TRIM3O75382 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM3O75382 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.15■□□□□ 0.5
TRIM3O75382 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.5
TRIM3O75382 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
TRIM3O75382 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
TRIM3O75382 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
TRIM3O75382 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM3O75382 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.14■□□□□ 0.49
TRIM3O75382 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM3O75382 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM3O75382 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM3O75382 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM3O75382 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.14■□□□□ 0.49
TRIM3O75382 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
TRIM3O75382 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
TRIM3O75382 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM3O75382 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM3O75382 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.14■□□□□ 0.49
TRIM3O75382 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.14■□□□□ 0.49
TRIM3O75382 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.14■□□□□ 0.49
TRIM3O75382 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.14■□□□□ 0.49
TRIM3O75382 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.14■□□□□ 0.49
TRIM3O75382 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
TRIM3O75382 AC124016.1-201ENST00000609552 612 ntBASIC18.14■□□□□ 0.49
TRIM3O75382 AL121906.2-201ENST00000621597 723 ntBASIC18.14■□□□□ 0.49
TRIM3O75382 FAM197Y4-202ENST00000622692 608 ntBASIC18.14■□□□□ 0.49
TRIM3O75382 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
TRIM3O75382 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM3O75382 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM3O75382 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM3O75382 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM3O75382 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM3O75382 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM3O75382 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.14■□□□□ 0.49
TRIM3O75382 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM3O75382 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM3O75382 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
TRIM3O75382 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM3O75382 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM3O75382 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
TRIM3O75382 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM3O75382 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms