Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.22■□□□□ 0.35
GMDSO60547 MAP2K4P1-201ENST00000438453 1195 ntBASIC17.22■□□□□ 0.35
GMDSO60547 TSPY6P-201ENST00000448518 926 ntBASIC17.22■□□□□ 0.35
GMDSO60547 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC17.22■□□□□ 0.35
GMDSO60547 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
GMDSO60547 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GMDSO60547 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.22■□□□□ 0.35
GMDSO60547 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GMDSO60547 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC17.22■□□□□ 0.35
GMDSO60547 WT1-AS_3.1-201ENST00000613262 234 ntBASIC17.22■□□□□ 0.35
GMDSO60547 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC17.22■□□□□ 0.35
GMDSO60547 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GMDSO60547 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GMDSO60547 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.22■□□□□ 0.35
GMDSO60547 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
GMDSO60547 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GMDSO60547 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.22■□□□□ 0.35
GMDSO60547 TREX1-205ENST00000625293 1783 ntBASIC17.22■□□□□ 0.35
GMDSO60547 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
GMDSO60547 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
GMDSO60547 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GMDSO60547 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
GMDSO60547 TMEM179-206ENST00000616017 1645 ntBASIC17.21■□□□□ 0.35
GMDSO60547 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GMDSO60547 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
GMDSO60547 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
GMDSO60547 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
GMDSO60547 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.21■□□□□ 0.35
GMDSO60547 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
GMDSO60547 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
GMDSO60547 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GMDSO60547 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GMDSO60547 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GMDSO60547 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.21■□□□□ 0.35
GMDSO60547 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
GMDSO60547 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC17.21■□□□□ 0.35
GMDSO60547 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC17.21■□□□□ 0.35
GMDSO60547 MIPEPP3-201ENST00000412105 444 ntBASIC17.21■□□□□ 0.35
GMDSO60547 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC17.21■□□□□ 0.35
GMDSO60547 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.21■□□□□ 0.35
GMDSO60547 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.21■□□□□ 0.35
GMDSO60547 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
GMDSO60547 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GMDSO60547 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
GMDSO60547 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
GMDSO60547 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.21■□□□□ 0.35
GMDSO60547 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.21■□□□□ 0.35
GMDSO60547 PTBP1P-201ENST00000554374 1601 ntBASIC17.21■□□□□ 0.35
GMDSO60547 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
GMDSO60547 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
GMDSO60547 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GMDSO60547 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GMDSO60547 Z82202.1-201ENST00000623446 1880 ntBASIC17.2■□□□□ 0.34
GMDSO60547 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.2■□□□□ 0.34
GMDSO60547 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GMDSO60547 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GMDSO60547 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
GMDSO60547 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
GMDSO60547 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
GMDSO60547 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
GMDSO60547 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.2■□□□□ 0.34
GMDSO60547 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
GMDSO60547 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GMDSO60547 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
GMDSO60547 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GMDSO60547 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
GMDSO60547 SERPINH1P1-201ENST00000419794 1249 ntBASIC17.2■□□□□ 0.34
GMDSO60547 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC17.2■□□□□ 0.34
GMDSO60547 C2orf69P4-201ENST00000565394 541 ntBASIC17.2■□□□□ 0.34
GMDSO60547 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GMDSO60547 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GMDSO60547 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.2■□□□□ 0.34
GMDSO60547 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GMDSO60547 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.19■□□□□ 0.34
GMDSO60547 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GMDSO60547 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
GMDSO60547 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GMDSO60547 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.19■□□□□ 0.34
GMDSO60547 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.19■□□□□ 0.34
GMDSO60547 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GMDSO60547 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
GMDSO60547 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GMDSO60547 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
GMDSO60547 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.19■□□□□ 0.34
GMDSO60547 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GMDSO60547 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
GMDSO60547 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
GMDSO60547 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC17.19■□□□□ 0.34
GMDSO60547 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
GMDSO60547 MIR4758-201ENST00000577688 71 ntBASIC17.19■□□□□ 0.34
GMDSO60547 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC17.19■□□□□ 0.34
GMDSO60547 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
GMDSO60547 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC17.19■□□□□ 0.34
GMDSO60547 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
GMDSO60547 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
GMDSO60547 AC092118.2-201ENST00000613495 667 ntBASIC17.19■□□□□ 0.34
GMDSO60547 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.19■□□□□ 0.34
GMDSO60547 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.19■□□□□ 0.34
GMDSO60547 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GMDSO60547 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms