Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF13O43567 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF13O43567 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF13O43567 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF13O43567 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF13O43567 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF13O43567 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RNF13O43567 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.74■□□□□ 0.43
RNF13O43567 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
RNF13O43567 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.74■□□□□ 0.43
RNF13O43567 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF13O43567 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF13O43567 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RNF13O43567 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF13O43567 Z82202.1-201ENST00000623446 1880 ntBASIC17.74■□□□□ 0.43
RNF13O43567 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF13O43567 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF13O43567 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.74■□□□□ 0.43
RNF13O43567 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF13O43567 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
RNF13O43567 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.74■□□□□ 0.43
RNF13O43567 PPP1R14BP2-201ENST00000426284 444 ntBASIC17.74■□□□□ 0.43
RNF13O43567 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC17.74■□□□□ 0.43
RNF13O43567 AC097658.1-201ENST00000475555 843 ntBASIC17.74■□□□□ 0.43
RNF13O43567 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.74■□□□□ 0.43
RNF13O43567 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.74■□□□□ 0.43
RNF13O43567 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
RNF13O43567 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC17.74■□□□□ 0.43
RNF13O43567 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF13O43567 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF13O43567 AL109923.1-201ENST00000618799 583 ntBASIC17.74■□□□□ 0.43
RNF13O43567 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF13O43567 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
RNF13O43567 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF13O43567 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RNF13O43567 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RNF13O43567 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RNF13O43567 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF13O43567 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF13O43567 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF13O43567 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.73■□□□□ 0.43
RNF13O43567 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF13O43567 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
RNF13O43567 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.73■□□□□ 0.43
RNF13O43567 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF13O43567 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.73■□□□□ 0.43
RNF13O43567 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF13O43567 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
RNF13O43567 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.73■□□□□ 0.43
RNF13O43567 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF13O43567 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RNF13O43567 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF13O43567 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RNF13O43567 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RNF13O43567 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC17.73■□□□□ 0.43
RNF13O43567 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.73■□□□□ 0.43
RNF13O43567 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC17.73■□□□□ 0.43
RNF13O43567 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF13O43567 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF13O43567 AC005829.2-201ENST00000571422 1056 ntBASIC17.73■□□□□ 0.43
RNF13O43567 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC17.73■□□□□ 0.43
RNF13O43567 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF13O43567 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.73■□□□□ 0.43
RNF13O43567 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
RNF13O43567 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
RNF13O43567 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF13O43567 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RNF13O43567 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.73■□□□□ 0.43
RNF13O43567 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RNF13O43567 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF13O43567 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
RNF13O43567 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF13O43567 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.72■□□□□ 0.43
RNF13O43567 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF13O43567 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.72■□□□□ 0.43
RNF13O43567 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.72■□□□□ 0.43
RNF13O43567 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.72■□□□□ 0.43
RNF13O43567 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF13O43567 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC17.72■□□□□ 0.43
RNF13O43567 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF13O43567 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF13O43567 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF13O43567 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF13O43567 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
RNF13O43567 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC17.72■□□□□ 0.43
RNF13O43567 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RNF13O43567 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.72■□□□□ 0.43
RNF13O43567 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF13O43567 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF13O43567 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF13O43567 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RNF13O43567 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF13O43567 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
RNF13O43567 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
RNF13O43567 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.72■□□□□ 0.43
RNF13O43567 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF13O43567 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF13O43567 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
RNF13O43567 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.72■□□□□ 0.43
RNF13O43567 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms