Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMAD6O43541 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SMAD6O43541 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
SMAD6O43541 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.75■□□□□ 0.75
SMAD6O43541 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.75■□□□□ 0.75
SMAD6O43541 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMAD6O43541 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMAD6O43541 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMAD6O43541 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SMAD6O43541 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMAD6O43541 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SMAD6O43541 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.75■□□□□ 0.75
SMAD6O43541 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
SMAD6O43541 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.75■□□□□ 0.75
SMAD6O43541 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.75■□□□□ 0.75
SMAD6O43541 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.75■□□□□ 0.75
SMAD6O43541 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.75■□□□□ 0.75
SMAD6O43541 BX088651.1-201ENST00000540551 451 ntBASIC19.75■□□□□ 0.75
SMAD6O43541 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMAD6O43541 AL031985.4-201ENST00000642138 673 ntBASIC19.75■□□□□ 0.75
SMAD6O43541 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SMAD6O43541 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SMAD6O43541 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMAD6O43541 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.75■□□□□ 0.75
SMAD6O43541 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMAD6O43541 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SMAD6O43541 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMAD6O43541 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMAD6O43541 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
SMAD6O43541 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SMAD6O43541 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SMAD6O43541 AC073130.3-201ENST00000624389 2278 ntBASIC19.74■□□□□ 0.75
SMAD6O43541 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.74■□□□□ 0.75
SMAD6O43541 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMAD6O43541 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
SMAD6O43541 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.74■□□□□ 0.75
SMAD6O43541 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMAD6O43541 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SMAD6O43541 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.74■□□□□ 0.75
SMAD6O43541 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.74■□□□□ 0.75
SMAD6O43541 AC116562.2-201ENST00000507042 360 ntBASIC19.74■□□□□ 0.75
SMAD6O43541 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.74■□□□□ 0.75
SMAD6O43541 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SMAD6O43541 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.74■□□□□ 0.75
SMAD6O43541 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.74■□□□□ 0.75
SMAD6O43541 AC125437.2-201ENST00000625180 2167 ntBASIC19.74■□□□□ 0.75
SMAD6O43541 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMAD6O43541 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.74■□□□□ 0.75
SMAD6O43541 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.74■□□□□ 0.75
SMAD6O43541 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SMAD6O43541 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.73■□□□□ 0.75
SMAD6O43541 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMAD6O43541 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.73■□□□□ 0.75
SMAD6O43541 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMAD6O43541 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SMAD6O43541 MESTP1-201ENST00000404287 994 ntBASIC19.73■□□□□ 0.75
SMAD6O43541 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.73■□□□□ 0.75
SMAD6O43541 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.73■□□□□ 0.75
SMAD6O43541 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.73■□□□□ 0.75
SMAD6O43541 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SMAD6O43541 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SMAD6O43541 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.73■□□□□ 0.75
SMAD6O43541 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMAD6O43541 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.73■□□□□ 0.75
SMAD6O43541 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.73■□□□□ 0.75
SMAD6O43541 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.73■□□□□ 0.75
SMAD6O43541 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SMAD6O43541 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMAD6O43541 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SMAD6O43541 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMAD6O43541 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMAD6O43541 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
SMAD6O43541 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SMAD6O43541 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.72■□□□□ 0.75
SMAD6O43541 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.72■□□□□ 0.75
SMAD6O43541 RBM17P1-201ENST00000453646 1190 ntBASIC19.72■□□□□ 0.75
SMAD6O43541 AC011506.1-201ENST00000474329 610 ntBASIC19.72■□□□□ 0.75
SMAD6O43541 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SMAD6O43541 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.72■□□□□ 0.75
SMAD6O43541 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.72■□□□□ 0.75
SMAD6O43541 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.72■□□□□ 0.75
SMAD6O43541 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMAD6O43541 AC131212.4-201ENST00000623606 975 ntBASIC19.72■□□□□ 0.75
SMAD6O43541 AC073912.3-201ENST00000624414 853 ntBASIC19.72■□□□□ 0.75
SMAD6O43541 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
SMAD6O43541 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
SMAD6O43541 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
SMAD6O43541 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.72■□□□□ 0.75
SMAD6O43541 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.72■□□□□ 0.75
SMAD6O43541 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMAD6O43541 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMAD6O43541 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SMAD6O43541 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMAD6O43541 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.71■□□□□ 0.75
SMAD6O43541 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SMAD6O43541 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMAD6O43541 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMAD6O43541 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMAD6O43541 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMAD6O43541 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms