Protein–RNA interactions for Protein: O15050

TRANK1, TPR and ankyrin repeat-containing protein 1, humanhuman

Predictions only

Length 2,925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRANK1O15050 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRANK1O15050 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
TRANK1O15050 PPIH-202ENST00000372549 327 ntTSL 3 BASIC20.61■□□□□ 0.89
TRANK1O15050 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.61■□□□□ 0.89
TRANK1O15050 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC20.61■□□□□ 0.89
TRANK1O15050 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC20.61■□□□□ 0.89
TRANK1O15050 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRANK1O15050 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
TRANK1O15050 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRANK1O15050 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
TRANK1O15050 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
TRANK1O15050 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
TRANK1O15050 AL031008.1-201ENST00000619963 541 ntBASIC20.6■□□□□ 0.89
TRANK1O15050 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRANK1O15050 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRANK1O15050 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TRANK1O15050 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.6■□□□□ 0.89
TRANK1O15050 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRANK1O15050 ILF2-202ENST00000368681 726 ntTSL 2 BASIC20.6■□□□□ 0.89
TRANK1O15050 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC20.6■□□□□ 0.89
TRANK1O15050 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TRANK1O15050 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
TRANK1O15050 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
TRANK1O15050 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
TRANK1O15050 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRANK1O15050 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
TRANK1O15050 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRANK1O15050 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.59■□□□□ 0.89
TRANK1O15050 TMEM179-206ENST00000616017 1645 ntBASIC20.59■□□□□ 0.89
TRANK1O15050 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRANK1O15050 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRANK1O15050 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.59■□□□□ 0.89
TRANK1O15050 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
TRANK1O15050 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
TRANK1O15050 AC139530.3-201ENST00000620344 690 ntBASIC20.59■□□□□ 0.89
TRANK1O15050 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRANK1O15050 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.59■□□□□ 0.89
TRANK1O15050 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.59■□□□□ 0.89
TRANK1O15050 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
TRANK1O15050 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC20.59■□□□□ 0.89
TRANK1O15050 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRANK1O15050 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
TRANK1O15050 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRANK1O15050 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRANK1O15050 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRANK1O15050 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRANK1O15050 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRANK1O15050 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRANK1O15050 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
TRANK1O15050 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.59■□□□□ 0.89
TRANK1O15050 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC20.59■□□□□ 0.89
TRANK1O15050 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.59■□□□□ 0.89
TRANK1O15050 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC20.59■□□□□ 0.89
TRANK1O15050 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC20.58■□□□□ 0.89
TRANK1O15050 FAAHP1-202ENST00000446499 1238 ntBASIC20.58■□□□□ 0.89
TRANK1O15050 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC20.58■□□□□ 0.89
TRANK1O15050 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC20.58■□□□□ 0.89
TRANK1O15050 IFNL4P1-201ENST00000607083 540 ntBASIC20.58■□□□□ 0.89
TRANK1O15050 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.58■□□□□ 0.89
TRANK1O15050 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
TRANK1O15050 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
TRANK1O15050 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
TRANK1O15050 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TRANK1O15050 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
TRANK1O15050 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
TRANK1O15050 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TRANK1O15050 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC20.57■□□□□ 0.88
TRANK1O15050 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRANK1O15050 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC20.57■□□□□ 0.88
TRANK1O15050 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
TRANK1O15050 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.57■□□□□ 0.88
TRANK1O15050 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRANK1O15050 EP400NL-214ENST00000641289 2402 ntBASIC20.57■□□□□ 0.88
TRANK1O15050 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRANK1O15050 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC20.57■□□□□ 0.88
TRANK1O15050 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC20.57■□□□□ 0.88
TRANK1O15050 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.57■□□□□ 0.88
TRANK1O15050 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRANK1O15050 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRANK1O15050 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC20.57■□□□□ 0.88
TRANK1O15050 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRANK1O15050 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.56■□□□□ 0.88
TRANK1O15050 FP700111.2-201ENST00000619190 1892 ntBASIC20.56■□□□□ 0.88
TRANK1O15050 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRANK1O15050 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.56■□□□□ 0.88
TRANK1O15050 PHGDH-210ENST00000641115 1638 ntBASIC20.56■□□□□ 0.88
TRANK1O15050 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRANK1O15050 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC20.56■□□□□ 0.88
TRANK1O15050 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC20.56■□□□□ 0.88
TRANK1O15050 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC20.56■□□□□ 0.88
TRANK1O15050 TBCB-205ENST00000585746 875 ntTSL 3 BASIC20.56■□□□□ 0.88
TRANK1O15050 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TRANK1O15050 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TRANK1O15050 DPP3P2-201ENST00000416030 1696 ntBASIC20.56■□□□□ 0.88
TRANK1O15050 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRANK1O15050 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRANK1O15050 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
TRANK1O15050 AL645929.1-201ENST00000420084 975 ntBASIC20.56■□□□□ 0.88
TRANK1O15050 RNA5SP419-201ENST00000515908 135 ntBASIC20.56■□□□□ 0.88
TRANK1O15050 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms