Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
SEMA3EO15041 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SEMA3EO15041 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC23.53■■□□□ 1.36
SEMA3EO15041 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC23.53■■□□□ 1.36
SEMA3EO15041 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC23.53■■□□□ 1.36
SEMA3EO15041 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC23.53■■□□□ 1.36
SEMA3EO15041 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC23.53■■□□□ 1.36
SEMA3EO15041 FDX2-206ENST00000492239 773 ntTSL 2 BASIC23.53■■□□□ 1.36
SEMA3EO15041 TMA16-209ENST00000513272 803 ntTSL 2 BASIC23.53■■□□□ 1.36
SEMA3EO15041 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC23.53■■□□□ 1.36
SEMA3EO15041 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC23.53■■□□□ 1.36
SEMA3EO15041 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
SEMA3EO15041 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC23.52■■□□□ 1.36
SEMA3EO15041 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC23.52■■□□□ 1.36
SEMA3EO15041 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC23.52■■□□□ 1.36
SEMA3EO15041 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC23.52■■□□□ 1.36
SEMA3EO15041 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SEMA3EO15041 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SEMA3EO15041 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC23.52■■□□□ 1.36
SEMA3EO15041 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SEMA3EO15041 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SEMA3EO15041 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC23.52■■□□□ 1.36
SEMA3EO15041 MIR1224-201ENST00000408193 85 ntBASIC23.52■■□□□ 1.36
SEMA3EO15041 MFAP1P1-201ENST00000442257 1255 ntBASIC23.52■■□□□ 1.36
SEMA3EO15041 CYGB-204ENST00000589342 815 ntTSL 3 BASIC23.52■■□□□ 1.36
SEMA3EO15041 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SEMA3EO15041 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
SEMA3EO15041 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SEMA3EO15041 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC23.52■■□□□ 1.36
SEMA3EO15041 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC23.52■■□□□ 1.36
SEMA3EO15041 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SEMA3EO15041 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SEMA3EO15041 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
SEMA3EO15041 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SEMA3EO15041 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SEMA3EO15041 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SEMA3EO15041 ANKRD18DP-204ENST00000455355 1975 ntBASIC23.51■■□□□ 1.35
SEMA3EO15041 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SEMA3EO15041 LINC01006-201ENST00000333319 2292 ntBASIC23.51■■□□□ 1.35
SEMA3EO15041 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
SEMA3EO15041 TMPOP1-202ENST00000424642 1267 ntBASIC23.51■■□□□ 1.35
SEMA3EO15041 SLC25A3P1-201ENST00000443844 931 ntBASIC23.51■■□□□ 1.35
SEMA3EO15041 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC23.51■■□□□ 1.35
SEMA3EO15041 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SEMA3EO15041 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC23.51■■□□□ 1.35
SEMA3EO15041 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SEMA3EO15041 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SEMA3EO15041 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SEMA3EO15041 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SEMA3EO15041 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC23.51■■□□□ 1.35
SEMA3EO15041 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SEMA3EO15041 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SEMA3EO15041 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC23.5■■□□□ 1.35
SEMA3EO15041 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
SEMA3EO15041 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SEMA3EO15041 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SEMA3EO15041 KRT8P41-201ENST00000533985 1514 ntBASIC23.5■■□□□ 1.35
SEMA3EO15041 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SEMA3EO15041 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC23.5■■□□□ 1.35
SEMA3EO15041 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
SEMA3EO15041 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
SEMA3EO15041 AC005521.1-201ENST00000393351 872 ntBASIC23.5■■□□□ 1.35
SEMA3EO15041 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC23.5■■□□□ 1.35
SEMA3EO15041 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC23.5■■□□□ 1.35
SEMA3EO15041 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC23.5■■□□□ 1.35
SEMA3EO15041 RN7SL850P-201ENST00000579959 291 ntBASIC23.5■■□□□ 1.35
SEMA3EO15041 CLN6-221ENST00000637494 765 ntTSL 5 BASIC23.5■■□□□ 1.35
SEMA3EO15041 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC23.5■■□□□ 1.35
SEMA3EO15041 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC23.5■■□□□ 1.35
SEMA3EO15041 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
SEMA3EO15041 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC23.5■■□□□ 1.35
SEMA3EO15041 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SEMA3EO15041 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
SEMA3EO15041 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
SEMA3EO15041 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SEMA3EO15041 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC23.49■■□□□ 1.35
SEMA3EO15041 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
SEMA3EO15041 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
SEMA3EO15041 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
SEMA3EO15041 TERF1P1-201ENST00000311003 1181 ntBASIC23.49■■□□□ 1.35
SEMA3EO15041 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SEMA3EO15041 AC128688.1-201ENST00000487626 519 ntBASIC23.49■■□□□ 1.35
SEMA3EO15041 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
SEMA3EO15041 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
SEMA3EO15041 AC010331.1-201ENST00000611423 582 ntBASIC23.49■■□□□ 1.35
SEMA3EO15041 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC23.49■■□□□ 1.35
SEMA3EO15041 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC23.49■■□□□ 1.35
SEMA3EO15041 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SEMA3EO15041 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SEMA3EO15041 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC23.49■■□□□ 1.35
SEMA3EO15041 AC073508.3-201ENST00000619697 1419 ntBASIC23.49■■□□□ 1.35
SEMA3EO15041 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC23.49■■□□□ 1.35
SEMA3EO15041 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
SEMA3EO15041 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC23.48■■□□□ 1.35
SEMA3EO15041 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.35
SEMA3EO15041 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
SEMA3EO15041 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
SEMA3EO15041 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
SEMA3EO15041 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
SEMA3EO15041 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC23.48■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms