Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CLDN4O14493 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN4O14493 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.4■□□□□ 0.54
CLDN4O14493 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN4O14493 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
CLDN4O14493 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
CLDN4O14493 AC073130.3-201ENST00000624389 2278 ntBASIC18.39■□□□□ 0.54
CLDN4O14493 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CLDN4O14493 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.54
CLDN4O14493 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CLDN4O14493 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.54
CLDN4O14493 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLDN4O14493 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.39■□□□□ 0.53
CLDN4O14493 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
CLDN4O14493 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CLDN4O14493 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLDN4O14493 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
CLDN4O14493 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLDN4O14493 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLDN4O14493 AL353807.1-201ENST00000427475 662 ntBASIC18.39■□□□□ 0.53
CLDN4O14493 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.39■□□□□ 0.53
CLDN4O14493 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.39■□□□□ 0.53
CLDN4O14493 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.39■□□□□ 0.53
CLDN4O14493 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.39■□□□□ 0.53
CLDN4O14493 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
CLDN4O14493 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.39■□□□□ 0.53
CLDN4O14493 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLDN4O14493 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLDN4O14493 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CLDN4O14493 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLDN4O14493 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CLDN4O14493 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLDN4O14493 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLDN4O14493 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CLDN4O14493 KRT8P8-201ENST00000434750 1448 ntBASIC18.39■□□□□ 0.53
CLDN4O14493 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.39■□□□□ 0.53
CLDN4O14493 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.39■□□□□ 0.53
CLDN4O14493 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLDN4O14493 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.38■□□□□ 0.53
CLDN4O14493 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN4O14493 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN4O14493 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
CLDN4O14493 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.38■□□□□ 0.53
CLDN4O14493 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CLDN4O14493 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.38■□□□□ 0.53
CLDN4O14493 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN4O14493 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.38■□□□□ 0.53
CLDN4O14493 RARRES2P10-201ENST00000564312 460 ntBASIC18.38■□□□□ 0.53
CLDN4O14493 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.38■□□□□ 0.53
CLDN4O14493 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN4O14493 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN4O14493 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.38■□□□□ 0.53
CLDN4O14493 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN4O14493 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN4O14493 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.37■□□□□ 0.53
CLDN4O14493 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN4O14493 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.37■□□□□ 0.53
CLDN4O14493 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.37■□□□□ 0.53
CLDN4O14493 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN4O14493 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN4O14493 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.37■□□□□ 0.53
CLDN4O14493 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
CLDN4O14493 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN4O14493 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN4O14493 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN4O14493 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.37■□□□□ 0.53
CLDN4O14493 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.37■□□□□ 0.53
CLDN4O14493 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CLDN4O14493 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.37■□□□□ 0.53
CLDN4O14493 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.37■□□□□ 0.53
CLDN4O14493 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.37■□□□□ 0.53
CLDN4O14493 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN4O14493 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN4O14493 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.37■□□□□ 0.53
CLDN4O14493 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
CLDN4O14493 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CLDN4O14493 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN4O14493 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN4O14493 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN4O14493 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN4O14493 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN4O14493 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN4O14493 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN4O14493 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.37■□□□□ 0.53
CLDN4O14493 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN4O14493 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN4O14493 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.37■□□□□ 0.53
CLDN4O14493 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN4O14493 AC138932.1-201ENST00000534164 6830 ntBASIC18.36■□□□□ 0.53
CLDN4O14493 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLDN4O14493 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CLDN4O14493 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLDN4O14493 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CLDN4O14493 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLDN4O14493 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CLDN4O14493 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLDN4O14493 MIR718-201ENST00000390190 70 ntBASIC18.36■□□□□ 0.53
CLDN4O14493 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLDN4O14493 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CLDN4O14493 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms