Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AL353801.3-201ENST00000609898 542 ntBASIC20.84■□□□□ 0.93
SOX1O00570 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SOX1O00570 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SOX1O00570 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
SOX1O00570 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SOX1O00570 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC20.83■□□□□ 0.93
SOX1O00570 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
SOX1O00570 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SOX1O00570 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
SOX1O00570 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.83■□□□□ 0.93
SOX1O00570 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SOX1O00570 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.83■□□□□ 0.93
SOX1O00570 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.83■□□□□ 0.93
SOX1O00570 AKR1C7P-201ENST00000305623 895 ntBASIC20.83■□□□□ 0.93
SOX1O00570 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
SOX1O00570 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC20.83■□□□□ 0.93
SOX1O00570 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC20.83■□□□□ 0.93
SOX1O00570 DRAXINP1-201ENST00000437611 948 ntBASIC20.83■□□□□ 0.93
SOX1O00570 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC20.83■□□□□ 0.93
SOX1O00570 PPIE-208ENST00000470213 927 ntTSL 3 BASIC20.83■□□□□ 0.93
SOX1O00570 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SOX1O00570 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC20.83■□□□□ 0.93
SOX1O00570 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SOX1O00570 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC20.83■□□□□ 0.93
SOX1O00570 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SOX1O00570 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.83■□□□□ 0.92
SOX1O00570 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.83■□□□□ 0.92
SOX1O00570 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SOX1O00570 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SOX1O00570 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.82■□□□□ 0.92
SOX1O00570 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
SOX1O00570 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SOX1O00570 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC20.82■□□□□ 0.92
SOX1O00570 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SOX1O00570 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
SOX1O00570 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC20.82■□□□□ 0.92
SOX1O00570 AC140113.2-201ENST00000604370 208 ntBASIC20.82■□□□□ 0.92
SOX1O00570 ABBA01031661.1-201ENST00000634362 1253 ntBASIC20.82■□□□□ 0.92
SOX1O00570 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.82■□□□□ 0.92
SOX1O00570 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.82■□□□□ 0.92
SOX1O00570 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SOX1O00570 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SOX1O00570 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC20.82■□□□□ 0.92
SOX1O00570 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC20.81■□□□□ 0.92
SOX1O00570 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.81■□□□□ 0.92
SOX1O00570 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SOX1O00570 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SOX1O00570 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC20.81■□□□□ 0.92
SOX1O00570 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SOX1O00570 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC20.81■□□□□ 0.92
SOX1O00570 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.92
SOX1O00570 TERC-201ENST00000602385 541 ntBASIC20.81■□□□□ 0.92
SOX1O00570 AC138894.3-201ENST00000603787 634 ntBASIC20.81■□□□□ 0.92
SOX1O00570 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SOX1O00570 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.81■□□□□ 0.92
SOX1O00570 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SOX1O00570 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.81■□□□□ 0.92
SOX1O00570 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
SOX1O00570 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SOX1O00570 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SOX1O00570 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SOX1O00570 KRT8P17-201ENST00000453110 1448 ntBASIC20.8■□□□□ 0.92
SOX1O00570 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.8■□□□□ 0.92
SOX1O00570 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SOX1O00570 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.8■□□□□ 0.92
SOX1O00570 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SOX1O00570 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SOX1O00570 MIR940-201ENST00000401276 94 ntBASIC20.8■□□□□ 0.92
SOX1O00570 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC20.8■□□□□ 0.92
SOX1O00570 TOB2P1-201ENST00000469761 992 ntBASIC20.8■□□□□ 0.92
SOX1O00570 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC20.8■□□□□ 0.92
SOX1O00570 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC20.8■□□□□ 0.92
SOX1O00570 TPM1-218ENST00000559281 851 ntTSL 5 BASIC20.8■□□□□ 0.92
SOX1O00570 AC106730.1-201ENST00000566722 1090 ntBASIC20.8■□□□□ 0.92
SOX1O00570 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC20.8■□□□□ 0.92
SOX1O00570 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC20.8■□□□□ 0.92
SOX1O00570 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC20.8■□□□□ 0.92
SOX1O00570 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SOX1O00570 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SOX1O00570 TP73-AS1-207ENST00000624167 988 ntBASIC20.8■□□□□ 0.92
SOX1O00570 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC20.8■□□□□ 0.92
SOX1O00570 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.8■□□□□ 0.92
SOX1O00570 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.8■□□□□ 0.92
SOX1O00570 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC20.8■□□□□ 0.92
SOX1O00570 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SOX1O00570 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SOX1O00570 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
SOX1O00570 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SOX1O00570 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SOX1O00570 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SOX1O00570 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SOX1O00570 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SOX1O00570 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SOX1O00570 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SOX1O00570 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SOX1O00570 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SOX1O00570 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SOX1O00570 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC20.79■□□□□ 0.92
SOX1O00570 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SOX1O00570 TLE1-202ENST00000376484 666 ntTSL 3 BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms