Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDLIM1O00151 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDLIM1O00151 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
PDLIM1O00151 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDLIM1O00151 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PDLIM1O00151 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDLIM1O00151 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDLIM1O00151 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDLIM1O00151 AC004911.1-201ENST00000416316 871 ntBASIC18.53■□□□□ 0.56
PDLIM1O00151 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.53■□□□□ 0.56
PDLIM1O00151 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.53■□□□□ 0.56
PDLIM1O00151 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.53■□□□□ 0.56
PDLIM1O00151 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.53■□□□□ 0.56
PDLIM1O00151 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.53■□□□□ 0.56
PDLIM1O00151 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDLIM1O00151 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PDLIM1O00151 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDLIM1O00151 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDLIM1O00151 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDLIM1O00151 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.53■□□□□ 0.56
PDLIM1O00151 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.53■□□□□ 0.56
PDLIM1O00151 TNRC18P3-201ENST00000441896 2691 ntBASIC18.53■□□□□ 0.56
PDLIM1O00151 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDLIM1O00151 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PDLIM1O00151 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDLIM1O00151 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.52■□□□□ 0.56
PDLIM1O00151 AC139713.2-201ENST00000641328 2723 ntBASIC18.52■□□□□ 0.56
PDLIM1O00151 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.52■□□□□ 0.56
PDLIM1O00151 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
PDLIM1O00151 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PDLIM1O00151 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PDLIM1O00151 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PDLIM1O00151 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PDLIM1O00151 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
PDLIM1O00151 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PDLIM1O00151 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.52■□□□□ 0.56
PDLIM1O00151 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
PDLIM1O00151 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PDLIM1O00151 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.52■□□□□ 0.56
PDLIM1O00151 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PDLIM1O00151 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PDLIM1O00151 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PDLIM1O00151 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PDLIM1O00151 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
PDLIM1O00151 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.55
PDLIM1O00151 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
PDLIM1O00151 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
PDLIM1O00151 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
PDLIM1O00151 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.55
PDLIM1O00151 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC18.51■□□□□ 0.55
PDLIM1O00151 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDLIM1O00151 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDLIM1O00151 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDLIM1O00151 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.51■□□□□ 0.55
PDLIM1O00151 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDLIM1O00151 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDLIM1O00151 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDLIM1O00151 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.51■□□□□ 0.55
PDLIM1O00151 AC018470.1-201ENST00000624790 3129 ntBASIC18.51■□□□□ 0.55
PDLIM1O00151 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.51■□□□□ 0.55
PDLIM1O00151 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.51■□□□□ 0.55
PDLIM1O00151 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDLIM1O00151 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDLIM1O00151 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PDLIM1O00151 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PDLIM1O00151 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.51■□□□□ 0.55
PDLIM1O00151 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
PDLIM1O00151 MFSD11-216ENST00000590393 1141 ntBASIC18.51■□□□□ 0.55
PDLIM1O00151 MYCNOS-205ENST00000641950 531 ntBASIC18.51■□□□□ 0.55
PDLIM1O00151 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDLIM1O00151 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
PDLIM1O00151 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
PDLIM1O00151 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
PDLIM1O00151 AC099398.1-201ENST00000567919 2776 ntBASIC18.51■□□□□ 0.55
PDLIM1O00151 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDLIM1O00151 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.51■□□□□ 0.55
PDLIM1O00151 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.51■□□□□ 0.55
PDLIM1O00151 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDLIM1O00151 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
PDLIM1O00151 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDLIM1O00151 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.5■□□□□ 0.55
PDLIM1O00151 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.5■□□□□ 0.55
PDLIM1O00151 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.5■□□□□ 0.55
PDLIM1O00151 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDLIM1O00151 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
PDLIM1O00151 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
PDLIM1O00151 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDLIM1O00151 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDLIM1O00151 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDLIM1O00151 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.5■□□□□ 0.55
PDLIM1O00151 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.5■□□□□ 0.55
PDLIM1O00151 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
PDLIM1O00151 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.5■□□□□ 0.55
PDLIM1O00151 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.5■□□□□ 0.55
PDLIM1O00151 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.5■□□□□ 0.55
PDLIM1O00151 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
PDLIM1O00151 SLC7A5P2-201ENST00000553010 536 ntBASIC18.5■□□□□ 0.55
PDLIM1O00151 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.5■□□□□ 0.55
PDLIM1O00151 BID-214ENST00000617586 542 ntTSL 5 BASIC18.5■□□□□ 0.55
PDLIM1O00151 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms