Protein–RNA interactions for Protein: C9JI98

TMEM238, Transmembrane protein 238, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238C9JI98 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TMEM238C9JI98 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TMEM238C9JI98 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC13.72□□□□□ -0.21
TMEM238C9JI98 AC011484.1-201ENST00000377652 1995 ntBASIC13.72□□□□□ -0.21
TMEM238C9JI98 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TMEM238C9JI98 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
TMEM238C9JI98 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TMEM238C9JI98 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TMEM238C9JI98 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
TMEM238C9JI98 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC13.72□□□□□ -0.21
TMEM238C9JI98 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TMEM238C9JI98 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TMEM238C9JI98 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TMEM238C9JI98 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC13.72□□□□□ -0.21
TMEM238C9JI98 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TMEM238C9JI98 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TMEM238C9JI98 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TMEM238C9JI98 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TMEM238C9JI98 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TMEM238C9JI98 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
TMEM238C9JI98 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TMEM238C9JI98 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TMEM238C9JI98 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC13.71□□□□□ -0.21
TMEM238C9JI98 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TMEM238C9JI98 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TMEM238C9JI98 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TMEM238C9JI98 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
TMEM238C9JI98 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TMEM238C9JI98 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
TMEM238C9JI98 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC13.71□□□□□ -0.21
TMEM238C9JI98 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
TMEM238C9JI98 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC13.71□□□□□ -0.21
TMEM238C9JI98 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TMEM238C9JI98 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
TMEM238C9JI98 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
TMEM238C9JI98 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TMEM238C9JI98 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
TMEM238C9JI98 H19-201ENST00000411754 1788 ntTSL 5 BASIC13.71□□□□□ -0.22
TMEM238C9JI98 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TMEM238C9JI98 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC13.71□□□□□ -0.22
TMEM238C9JI98 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TMEM238C9JI98 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC13.71□□□□□ -0.22
TMEM238C9JI98 CROCCP1-201ENST00000426910 5675 ntBASIC13.7□□□□□ -0.22
TMEM238C9JI98 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TMEM238C9JI98 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TMEM238C9JI98 C1R-202ENST00000536053 2347 ntTSL 2 BASIC13.7□□□□□ -0.22
TMEM238C9JI98 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC13.7□□□□□ -0.22
TMEM238C9JI98 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC13.7□□□□□ -0.22
TMEM238C9JI98 AC133637.1-201ENST00000624115 1537 ntBASIC13.7□□□□□ -0.22
TMEM238C9JI98 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TMEM238C9JI98 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
TMEM238C9JI98 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TMEM238C9JI98 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TMEM238C9JI98 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TMEM238C9JI98 STX4-202ENST00000394998 1498 ntTSL 2 BASIC13.7□□□□□ -0.22
TMEM238C9JI98 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC13.7□□□□□ -0.22
TMEM238C9JI98 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TMEM238C9JI98 AL138781.2-201ENST00000617896 1843 ntBASIC13.7□□□□□ -0.22
TMEM238C9JI98 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC13.7□□□□□ -0.22
TMEM238C9JI98 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TMEM238C9JI98 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC13.7□□□□□ -0.22
TMEM238C9JI98 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TMEM238C9JI98 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC13.7□□□□□ -0.22
TMEM238C9JI98 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TMEM238C9JI98 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
TMEM238C9JI98 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC13.7□□□□□ -0.22
TMEM238C9JI98 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
TMEM238C9JI98 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TMEM238C9JI98 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC13.7□□□□□ -0.22
TMEM238C9JI98 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TMEM238C9JI98 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC13.7□□□□□ -0.22
TMEM238C9JI98 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
TMEM238C9JI98 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC13.7□□□□□ -0.22
TMEM238C9JI98 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TMEM238C9JI98 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TMEM238C9JI98 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
TMEM238C9JI98 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC13.7□□□□□ -0.22
TMEM238C9JI98 PCDHA1-201ENST00000378133 2726 ntBASIC13.7□□□□□ -0.22
TMEM238C9JI98 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM238C9JI98 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC13.69□□□□□ -0.22
TMEM238C9JI98 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM238C9JI98 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM238C9JI98 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM238C9JI98 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM238C9JI98 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC13.69□□□□□ -0.22
TMEM238C9JI98 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC13.69□□□□□ -0.22
TMEM238C9JI98 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM238C9JI98 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM238C9JI98 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC13.69□□□□□ -0.22
TMEM238C9JI98 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM238C9JI98 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM238C9JI98 LSM4-201ENST00000252816 986 ntTSL 2 BASIC13.69□□□□□ -0.22
TMEM238C9JI98 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC13.69□□□□□ -0.22
TMEM238C9JI98 AC009299.2-201ENST00000482477 511 ntBASIC13.69□□□□□ -0.22
TMEM238C9JI98 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM238C9JI98 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC13.69□□□□□ -0.22
TMEM238C9JI98 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM238C9JI98 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM238C9JI98 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM238C9JI98 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms