Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
NPIPB4C9JG80 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.29■□□□□ 0.36
NPIPB4C9JG80 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
NPIPB4C9JG80 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NPIPB4C9JG80 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
NPIPB4C9JG80 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NPIPB4C9JG80 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NPIPB4C9JG80 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
NPIPB4C9JG80 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
NPIPB4C9JG80 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.28■□□□□ 0.36
NPIPB4C9JG80 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
NPIPB4C9JG80 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NPIPB4C9JG80 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPIPB4C9JG80 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPIPB4C9JG80 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPIPB4C9JG80 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPIPB4C9JG80 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPIPB4C9JG80 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPIPB4C9JG80 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
NPIPB4C9JG80 KRT17P3-201ENST00000420566 1262 ntBASIC17.28■□□□□ 0.36
NPIPB4C9JG80 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.28■□□□□ 0.36
NPIPB4C9JG80 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC17.28■□□□□ 0.36
NPIPB4C9JG80 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.28■□□□□ 0.36
NPIPB4C9JG80 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
NPIPB4C9JG80 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.28■□□□□ 0.36
NPIPB4C9JG80 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.28■□□□□ 0.36
NPIPB4C9JG80 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPIPB4C9JG80 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.28■□□□□ 0.36
NPIPB4C9JG80 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
NPIPB4C9JG80 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NPIPB4C9JG80 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPIPB4C9JG80 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPIPB4C9JG80 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPIPB4C9JG80 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPIPB4C9JG80 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
NPIPB4C9JG80 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.27■□□□□ 0.36
NPIPB4C9JG80 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NPIPB4C9JG80 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.27■□□□□ 0.36
NPIPB4C9JG80 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NPIPB4C9JG80 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.27■□□□□ 0.36
NPIPB4C9JG80 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NPIPB4C9JG80 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NPIPB4C9JG80 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NPIPB4C9JG80 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.27■□□□□ 0.36
NPIPB4C9JG80 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NPIPB4C9JG80 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.27■□□□□ 0.36
NPIPB4C9JG80 RNA5SP413-201ENST00000516373 109 ntBASIC17.27■□□□□ 0.36
NPIPB4C9JG80 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NPIPB4C9JG80 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.27■□□□□ 0.36
NPIPB4C9JG80 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.27■□□□□ 0.36
NPIPB4C9JG80 MTDHP1-201ENST00000605323 784 ntBASIC17.27■□□□□ 0.36
NPIPB4C9JG80 AC069544.1-201ENST00000609399 999 ntBASIC17.27■□□□□ 0.36
NPIPB4C9JG80 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.27■□□□□ 0.36
NPIPB4C9JG80 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.27■□□□□ 0.36
NPIPB4C9JG80 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.27■□□□□ 0.36
NPIPB4C9JG80 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
NPIPB4C9JG80 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NPIPB4C9JG80 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
NPIPB4C9JG80 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
NPIPB4C9JG80 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
NPIPB4C9JG80 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
NPIPB4C9JG80 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
NPIPB4C9JG80 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
NPIPB4C9JG80 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
NPIPB4C9JG80 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
NPIPB4C9JG80 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NPIPB4C9JG80 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NPIPB4C9JG80 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
NPIPB4C9JG80 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.26■□□□□ 0.35
NPIPB4C9JG80 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NPIPB4C9JG80 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NPIPB4C9JG80 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
NPIPB4C9JG80 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NPIPB4C9JG80 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NPIPB4C9JG80 NBPF21P-201ENST00000425093 1451 ntBASIC17.26■□□□□ 0.35
NPIPB4C9JG80 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.26■□□□□ 0.35
NPIPB4C9JG80 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
NPIPB4C9JG80 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NPIPB4C9JG80 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
NPIPB4C9JG80 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.26■□□□□ 0.35
NPIPB4C9JG80 LINC01465-201ENST00000408887 1940 ntBASIC17.26■□□□□ 0.35
NPIPB4C9JG80 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.26■□□□□ 0.35
NPIPB4C9JG80 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.26■□□□□ 0.35
NPIPB4C9JG80 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
NPIPB4C9JG80 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.26■□□□□ 0.35
NPIPB4C9JG80 KRT18P6-201ENST00000555540 1265 ntBASIC17.26■□□□□ 0.35
NPIPB4C9JG80 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.26■□□□□ 0.35
NPIPB4C9JG80 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NPIPB4C9JG80 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NPIPB4C9JG80 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
NPIPB4C9JG80 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
NPIPB4C9JG80 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.26■□□□□ 0.35
NPIPB4C9JG80 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
NPIPB4C9JG80 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NPIPB4C9JG80 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NPIPB4C9JG80 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NPIPB4C9JG80 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NPIPB4C9JG80 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NPIPB4C9JG80 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
NPIPB4C9JG80 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms