Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC21.02■□□□□ 0.96
LRRC53A6NM62 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
LRRC53A6NM62 AC120498.9-201ENST00000339021 3867 ntBASIC21.02■□□□□ 0.96
LRRC53A6NM62 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC21.02■□□□□ 0.95
LRRC53A6NM62 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
LRRC53A6NM62 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
LRRC53A6NM62 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
LRRC53A6NM62 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
LRRC53A6NM62 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
LRRC53A6NM62 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
LRRC53A6NM62 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC21.01■□□□□ 0.95
LRRC53A6NM62 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
LRRC53A6NM62 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LRRC53A6NM62 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LRRC53A6NM62 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LRRC53A6NM62 AL049812.1-201ENST00000432563 2267 ntBASIC21.01■□□□□ 0.95
LRRC53A6NM62 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LRRC53A6NM62 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.01■□□□□ 0.95
LRRC53A6NM62 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
LRRC53A6NM62 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC21.01■□□□□ 0.95
LRRC53A6NM62 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LRRC53A6NM62 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.01■□□□□ 0.95
LRRC53A6NM62 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
LRRC53A6NM62 AC006557.6-201ENST00000623071 864 ntBASIC21.01■□□□□ 0.95
LRRC53A6NM62 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LRRC53A6NM62 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
LRRC53A6NM62 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LRRC53A6NM62 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LRRC53A6NM62 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
LRRC53A6NM62 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LRRC53A6NM62 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LRRC53A6NM62 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
LRRC53A6NM62 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LRRC53A6NM62 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
LRRC53A6NM62 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LRRC53A6NM62 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LRRC53A6NM62 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
LRRC53A6NM62 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
LRRC53A6NM62 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC21■□□□□ 0.95
LRRC53A6NM62 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
LRRC53A6NM62 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC21■□□□□ 0.95
LRRC53A6NM62 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
LRRC53A6NM62 AC083906.2-201ENST00000511578 360 ntBASIC21■□□□□ 0.95
LRRC53A6NM62 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21■□□□□ 0.95
LRRC53A6NM62 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC21■□□□□ 0.95
LRRC53A6NM62 AL121832.2-201ENST00000610979 668 ntBASIC21■□□□□ 0.95
LRRC53A6NM62 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LRRC53A6NM62 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
LRRC53A6NM62 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC21■□□□□ 0.95
LRRC53A6NM62 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC21■□□□□ 0.95
LRRC53A6NM62 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC21■□□□□ 0.95
LRRC53A6NM62 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
LRRC53A6NM62 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LRRC53A6NM62 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
LRRC53A6NM62 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
LRRC53A6NM62 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.99■□□□□ 0.95
LRRC53A6NM62 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LRRC53A6NM62 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LRRC53A6NM62 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.99■□□□□ 0.95
LRRC53A6NM62 ZNF815P-204ENST00000434898 1737 ntBASIC20.99■□□□□ 0.95
LRRC53A6NM62 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.99■□□□□ 0.95
LRRC53A6NM62 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LRRC53A6NM62 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
LRRC53A6NM62 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
LRRC53A6NM62 AC091874.3-201ENST00000512672 1195 ntBASIC20.99■□□□□ 0.95
LRRC53A6NM62 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
LRRC53A6NM62 AC092118.2-201ENST00000613495 667 ntBASIC20.99■□□□□ 0.95
LRRC53A6NM62 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
LRRC53A6NM62 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LRRC53A6NM62 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.99■□□□□ 0.95
LRRC53A6NM62 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
LRRC53A6NM62 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LRRC53A6NM62 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.99■□□□□ 0.95
LRRC53A6NM62 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
LRRC53A6NM62 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LRRC53A6NM62 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.99■□□□□ 0.95
LRRC53A6NM62 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.98■□□□□ 0.95
LRRC53A6NM62 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
LRRC53A6NM62 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
LRRC53A6NM62 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
LRRC53A6NM62 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC20.98■□□□□ 0.95
LRRC53A6NM62 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LRRC53A6NM62 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.98■□□□□ 0.95
LRRC53A6NM62 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LRRC53A6NM62 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LRRC53A6NM62 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LRRC53A6NM62 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.98■□□□□ 0.95
LRRC53A6NM62 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.98■□□□□ 0.95
LRRC53A6NM62 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.98■□□□□ 0.95
LRRC53A6NM62 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.98■□□□□ 0.95
LRRC53A6NM62 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.98■□□□□ 0.95
LRRC53A6NM62 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.98■□□□□ 0.95
LRRC53A6NM62 AC141586.3-201ENST00000562166 1838 ntBASIC20.98■□□□□ 0.95
LRRC53A6NM62 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LRRC53A6NM62 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LRRC53A6NM62 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC20.98■□□□□ 0.95
LRRC53A6NM62 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
LRRC53A6NM62 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LRRC53A6NM62 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.97■□□□□ 0.95
LRRC53A6NM62 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms