Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TBC1D3BA6NDS4 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
TBC1D3BA6NDS4 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
TBC1D3BA6NDS4 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
TBC1D3BA6NDS4 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TBC1D3BA6NDS4 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TBC1D3BA6NDS4 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.82■□□□□ 0.76
TBC1D3BA6NDS4 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
TBC1D3BA6NDS4 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TBC1D3BA6NDS4 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
TBC1D3BA6NDS4 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TBC1D3BA6NDS4 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TBC1D3BA6NDS4 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TBC1D3BA6NDS4 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TBC1D3BA6NDS4 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.82■□□□□ 0.76
TBC1D3BA6NDS4 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.82■□□□□ 0.76
TBC1D3BA6NDS4 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TBC1D3BA6NDS4 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TBC1D3BA6NDS4 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
TBC1D3BA6NDS4 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TBC1D3BA6NDS4 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.82■□□□□ 0.76
TBC1D3BA6NDS4 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TBC1D3BA6NDS4 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.82■□□□□ 0.76
TBC1D3BA6NDS4 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.82■□□□□ 0.76
TBC1D3BA6NDS4 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.82■□□□□ 0.76
TBC1D3BA6NDS4 MFAP1P1-201ENST00000442257 1255 ntBASIC19.82■□□□□ 0.76
TBC1D3BA6NDS4 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TBC1D3BA6NDS4 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.82■□□□□ 0.76
TBC1D3BA6NDS4 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TBC1D3BA6NDS4 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
TBC1D3BA6NDS4 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.82■□□□□ 0.76
TBC1D3BA6NDS4 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TBC1D3BA6NDS4 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TBC1D3BA6NDS4 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.82■□□□□ 0.76
TBC1D3BA6NDS4 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TBC1D3BA6NDS4 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.82■□□□□ 0.76
TBC1D3BA6NDS4 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
TBC1D3BA6NDS4 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.81■□□□□ 0.76
TBC1D3BA6NDS4 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
TBC1D3BA6NDS4 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.81■□□□□ 0.76
TBC1D3BA6NDS4 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TBC1D3BA6NDS4 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TBC1D3BA6NDS4 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TBC1D3BA6NDS4 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.81■□□□□ 0.76
TBC1D3BA6NDS4 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TBC1D3BA6NDS4 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
TBC1D3BA6NDS4 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.81■□□□□ 0.76
TBC1D3BA6NDS4 AC104076.2-201ENST00000448912 469 ntBASIC19.81■□□□□ 0.76
TBC1D3BA6NDS4 AC091390.4-202ENST00000476426 537 ntBASIC19.81■□□□□ 0.76
TBC1D3BA6NDS4 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.81■□□□□ 0.76
TBC1D3BA6NDS4 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.81■□□□□ 0.76
TBC1D3BA6NDS4 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.81■□□□□ 0.76
TBC1D3BA6NDS4 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.81■□□□□ 0.76
TBC1D3BA6NDS4 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.81■□□□□ 0.76
TBC1D3BA6NDS4 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
TBC1D3BA6NDS4 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TBC1D3BA6NDS4 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
TBC1D3BA6NDS4 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TBC1D3BA6NDS4 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TBC1D3BA6NDS4 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.8■□□□□ 0.76
TBC1D3BA6NDS4 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TBC1D3BA6NDS4 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TBC1D3BA6NDS4 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TBC1D3BA6NDS4 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TBC1D3BA6NDS4 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TBC1D3BA6NDS4 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TBC1D3BA6NDS4 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TBC1D3BA6NDS4 INGX-201ENST00000359239 846 ntBASIC19.8■□□□□ 0.76
TBC1D3BA6NDS4 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.8■□□□□ 0.76
TBC1D3BA6NDS4 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.8■□□□□ 0.76
TBC1D3BA6NDS4 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TBC1D3BA6NDS4 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TBC1D3BA6NDS4 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.8■□□□□ 0.76
TBC1D3BA6NDS4 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.8■□□□□ 0.76
TBC1D3BA6NDS4 AL160286.2-201ENST00000567150 934 ntBASIC19.8■□□□□ 0.76
TBC1D3BA6NDS4 AC116562.4-202ENST00000641738 218 ntBASIC19.8■□□□□ 0.76
TBC1D3BA6NDS4 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TBC1D3BA6NDS4 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
TBC1D3BA6NDS4 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
TBC1D3BA6NDS4 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TBC1D3BA6NDS4 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TBC1D3BA6NDS4 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TBC1D3BA6NDS4 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
TBC1D3BA6NDS4 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TBC1D3BA6NDS4 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.79■□□□□ 0.76
TBC1D3BA6NDS4 FEM1AP1-201ENST00000431297 1995 ntBASIC19.79■□□□□ 0.76
TBC1D3BA6NDS4 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.79■□□□□ 0.76
TBC1D3BA6NDS4 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.79■□□□□ 0.76
TBC1D3BA6NDS4 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
TBC1D3BA6NDS4 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TBC1D3BA6NDS4 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.79■□□□□ 0.76
TBC1D3BA6NDS4 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.79■□□□□ 0.76
TBC1D3BA6NDS4 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TBC1D3BA6NDS4 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.79■□□□□ 0.76
TBC1D3BA6NDS4 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.79■□□□□ 0.76
TBC1D3BA6NDS4 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TBC1D3BA6NDS4 DUX4L26-201ENST00000489078 1255 ntBASIC19.79■□□□□ 0.76
TBC1D3BA6NDS4 Z85996.1-201ENST00000494644 937 ntBASIC19.79■□□□□ 0.76
TBC1D3BA6NDS4 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.79■□□□□ 0.76
TBC1D3BA6NDS4 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms