Protein–RNA interactions for Protein: A4UGR9

XIRP2, Xin actin-binding repeat-containing protein 2, humanhuman

Predictions only

Length 3,374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XIRP2A4UGR9 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
XIRP2A4UGR9 AC018553.1-201ENST00000616682 1458 ntBASIC20.45■□□□□ 0.86
XIRP2A4UGR9 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
XIRP2A4UGR9 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC20.45■□□□□ 0.86
XIRP2A4UGR9 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
XIRP2A4UGR9 RNA5SP419-201ENST00000515908 135 ntBASIC20.45■□□□□ 0.86
XIRP2A4UGR9 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
XIRP2A4UGR9 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
XIRP2A4UGR9 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.44■□□□□ 0.86
XIRP2A4UGR9 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
XIRP2A4UGR9 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
XIRP2A4UGR9 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
XIRP2A4UGR9 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
XIRP2A4UGR9 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
XIRP2A4UGR9 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
XIRP2A4UGR9 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
XIRP2A4UGR9 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
XIRP2A4UGR9 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
XIRP2A4UGR9 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
XIRP2A4UGR9 SLC25A6P4-201ENST00000586535 553 ntBASIC20.44■□□□□ 0.86
XIRP2A4UGR9 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
XIRP2A4UGR9 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
XIRP2A4UGR9 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.43■□□□□ 0.86
XIRP2A4UGR9 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC20.43■□□□□ 0.86
XIRP2A4UGR9 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
XIRP2A4UGR9 LINC01311-201ENST00000565162 1445 ntBASIC20.43■□□□□ 0.86
XIRP2A4UGR9 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
XIRP2A4UGR9 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
XIRP2A4UGR9 HLA-G-202ENST00000376815 851 ntBASIC20.43■□□□□ 0.86
XIRP2A4UGR9 HLA-G-203ENST00000376818 1127 ntBASIC20.43■□□□□ 0.86
XIRP2A4UGR9 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC20.43■□□□□ 0.86
XIRP2A4UGR9 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC20.43■□□□□ 0.86
XIRP2A4UGR9 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC20.43■□□□□ 0.86
XIRP2A4UGR9 AL645929.1-201ENST00000420084 975 ntBASIC20.43■□□□□ 0.86
XIRP2A4UGR9 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC20.43■□□□□ 0.86
XIRP2A4UGR9 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC20.43■□□□□ 0.86
XIRP2A4UGR9 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
XIRP2A4UGR9 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC20.42■□□□□ 0.86
XIRP2A4UGR9 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
XIRP2A4UGR9 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
XIRP2A4UGR9 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
XIRP2A4UGR9 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
XIRP2A4UGR9 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
XIRP2A4UGR9 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
XIRP2A4UGR9 KRT18P1-202ENST00000452408 1331 ntBASIC20.42■□□□□ 0.86
XIRP2A4UGR9 RPP21-221ENST00000428040 594 ntTSL 2 BASIC20.42■□□□□ 0.86
XIRP2A4UGR9 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
XIRP2A4UGR9 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
XIRP2A4UGR9 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
XIRP2A4UGR9 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
XIRP2A4UGR9 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.42■□□□□ 0.86
XIRP2A4UGR9 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.42■□□□□ 0.86
XIRP2A4UGR9 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC20.42■□□□□ 0.86
XIRP2A4UGR9 HLA-A-209ENST00000638375 975 ntBASIC20.42■□□□□ 0.86
XIRP2A4UGR9 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
XIRP2A4UGR9 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
XIRP2A4UGR9 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
XIRP2A4UGR9 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
XIRP2A4UGR9 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
XIRP2A4UGR9 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
XIRP2A4UGR9 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
XIRP2A4UGR9 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
XIRP2A4UGR9 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
XIRP2A4UGR9 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.41■□□□□ 0.86
XIRP2A4UGR9 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC20.41■□□□□ 0.86
XIRP2A4UGR9 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC20.41■□□□□ 0.86
XIRP2A4UGR9 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.41■□□□□ 0.86
XIRP2A4UGR9 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC20.41■□□□□ 0.86
XIRP2A4UGR9 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
XIRP2A4UGR9 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC20.41■□□□□ 0.86
XIRP2A4UGR9 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC20.41■□□□□ 0.86
XIRP2A4UGR9 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
XIRP2A4UGR9 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
XIRP2A4UGR9 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
XIRP2A4UGR9 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC20.41■□□□□ 0.86
XIRP2A4UGR9 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
XIRP2A4UGR9 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
XIRP2A4UGR9 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
XIRP2A4UGR9 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
XIRP2A4UGR9 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
XIRP2A4UGR9 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
XIRP2A4UGR9 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
XIRP2A4UGR9 AC140113.3-201ENST00000605663 199 ntBASIC20.4■□□□□ 0.86
XIRP2A4UGR9 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
XIRP2A4UGR9 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
XIRP2A4UGR9 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
XIRP2A4UGR9 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
XIRP2A4UGR9 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC20.4■□□□□ 0.86
XIRP2A4UGR9 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20.4■□□□□ 0.86
XIRP2A4UGR9 NT5C-210ENST00000582160 860 ntTSL 2 BASIC20.4■□□□□ 0.86
XIRP2A4UGR9 AC131212.4-201ENST00000623606 975 ntBASIC20.4■□□□□ 0.86
XIRP2A4UGR9 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
XIRP2A4UGR9 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
XIRP2A4UGR9 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
XIRP2A4UGR9 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
XIRP2A4UGR9 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
XIRP2A4UGR9 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
XIRP2A4UGR9 STARP1-201ENST00000397973 869 ntBASIC20.39■□□□□ 0.86
XIRP2A4UGR9 AP002383.4-201ENST00000442518 975 ntBASIC20.39■□□□□ 0.86
XIRP2A4UGR9 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.39■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms