Protein–RNA interactions for Protein: A1X283

SH3PXD2B, SH3 and PX domain-containing protein 2B, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2BA1X283 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SH3PXD2BA1X283 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SH3PXD2BA1X283 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.21■□□□□ 0.51
SH3PXD2BA1X283 Z82202.1-201ENST00000623446 1880 ntBASIC18.21■□□□□ 0.51
SH3PXD2BA1X283 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SH3PXD2BA1X283 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SH3PXD2BA1X283 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SH3PXD2BA1X283 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.21■□□□□ 0.51
SH3PXD2BA1X283 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.21■□□□□ 0.51
SH3PXD2BA1X283 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.21■□□□□ 0.51
SH3PXD2BA1X283 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
SH3PXD2BA1X283 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.21■□□□□ 0.51
SH3PXD2BA1X283 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.21■□□□□ 0.51
SH3PXD2BA1X283 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.21■□□□□ 0.51
SH3PXD2BA1X283 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.21■□□□□ 0.51
SH3PXD2BA1X283 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.21■□□□□ 0.51
SH3PXD2BA1X283 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
SH3PXD2BA1X283 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
SH3PXD2BA1X283 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
SH3PXD2BA1X283 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.5
SH3PXD2BA1X283 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
SH3PXD2BA1X283 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
SH3PXD2BA1X283 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SH3PXD2BA1X283 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SH3PXD2BA1X283 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.2■□□□□ 0.5
SH3PXD2BA1X283 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SH3PXD2BA1X283 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
SH3PXD2BA1X283 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SH3PXD2BA1X283 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SH3PXD2BA1X283 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SH3PXD2BA1X283 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.2■□□□□ 0.5
SH3PXD2BA1X283 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SH3PXD2BA1X283 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SH3PXD2BA1X283 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SH3PXD2BA1X283 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SH3PXD2BA1X283 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SH3PXD2BA1X283 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.2■□□□□ 0.5
SH3PXD2BA1X283 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.2■□□□□ 0.5
SH3PXD2BA1X283 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.2■□□□□ 0.5
SH3PXD2BA1X283 AC016405.3-201ENST00000607710 860 ntBASIC18.2■□□□□ 0.5
SH3PXD2BA1X283 AIRN-201ENST00000601203 4374 ntBASIC18.2■□□□□ 0.5
SH3PXD2BA1X283 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SH3PXD2BA1X283 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SH3PXD2BA1X283 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SH3PXD2BA1X283 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SH3PXD2BA1X283 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SH3PXD2BA1X283 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
SH3PXD2BA1X283 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.2■□□□□ 0.5
SH3PXD2BA1X283 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SH3PXD2BA1X283 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.2■□□□□ 0.5
SH3PXD2BA1X283 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SH3PXD2BA1X283 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.2■□□□□ 0.5
SH3PXD2BA1X283 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
SH3PXD2BA1X283 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SH3PXD2BA1X283 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SH3PXD2BA1X283 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SH3PXD2BA1X283 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SH3PXD2BA1X283 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SH3PXD2BA1X283 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
SH3PXD2BA1X283 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SH3PXD2BA1X283 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
SH3PXD2BA1X283 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.19■□□□□ 0.5
SH3PXD2BA1X283 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
SH3PXD2BA1X283 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.19■□□□□ 0.5
SH3PXD2BA1X283 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SH3PXD2BA1X283 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SH3PXD2BA1X283 AC007322.4-201ENST00000509611 723 ntBASIC18.19■□□□□ 0.5
SH3PXD2BA1X283 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.19■□□□□ 0.5
SH3PXD2BA1X283 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SH3PXD2BA1X283 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.19■□□□□ 0.5
SH3PXD2BA1X283 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.19■□□□□ 0.5
SH3PXD2BA1X283 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
SH3PXD2BA1X283 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SH3PXD2BA1X283 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.19■□□□□ 0.5
SH3PXD2BA1X283 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SH3PXD2BA1X283 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SH3PXD2BA1X283 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.19■□□□□ 0.5
SH3PXD2BA1X283 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.19■□□□□ 0.5
SH3PXD2BA1X283 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SH3PXD2BA1X283 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SH3PXD2BA1X283 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.18■□□□□ 0.5
SH3PXD2BA1X283 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SH3PXD2BA1X283 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
SH3PXD2BA1X283 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
SH3PXD2BA1X283 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
SH3PXD2BA1X283 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.18■□□□□ 0.5
SH3PXD2BA1X283 KRT16P6-202ENST00000425692 1426 ntBASIC18.18■□□□□ 0.5
SH3PXD2BA1X283 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
SH3PXD2BA1X283 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.18■□□□□ 0.5
SH3PXD2BA1X283 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.18■□□□□ 0.5
SH3PXD2BA1X283 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
SH3PXD2BA1X283 AC006015.1-201ENST00000429970 570 ntBASIC18.18■□□□□ 0.5
SH3PXD2BA1X283 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SH3PXD2BA1X283 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.18■□□□□ 0.5
SH3PXD2BA1X283 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SH3PXD2BA1X283 AC080038.1-201ENST00000611274 1154 ntBASIC18.18■□□□□ 0.5
SH3PXD2BA1X283 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
SH3PXD2BA1X283 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
SH3PXD2BA1X283 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SH3PXD2BA1X283 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms