Protein–RNA interactions for Protein: A0A0B4J262

TRAV8-6, T-cell receptor alpha variable 8-6 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6A0A0B4J262 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
TRAV8-6A0A0B4J262 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC14.36□□□□□ -0.11
TRAV8-6A0A0B4J262 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV8-6A0A0B4J262 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
TRAV8-6A0A0B4J262 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV8-6A0A0B4J262 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV8-6A0A0B4J262 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC14.35□□□□□ -0.11
TRAV8-6A0A0B4J262 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC14.35□□□□□ -0.11
TRAV8-6A0A0B4J262 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV8-6A0A0B4J262 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV8-6A0A0B4J262 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC14.35□□□□□ -0.11
TRAV8-6A0A0B4J262 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV8-6A0A0B4J262 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV8-6A0A0B4J262 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC14.35□□□□□ -0.11
TRAV8-6A0A0B4J262 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV8-6A0A0B4J262 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV8-6A0A0B4J262 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV8-6A0A0B4J262 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV8-6A0A0B4J262 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC14.35□□□□□ -0.11
TRAV8-6A0A0B4J262 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV8-6A0A0B4J262 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC14.35□□□□□ -0.11
TRAV8-6A0A0B4J262 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC14.35□□□□□ -0.11
TRAV8-6A0A0B4J262 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
TRAV8-6A0A0B4J262 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC14.35□□□□□ -0.11
TRAV8-6A0A0B4J262 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC14.35□□□□□ -0.11
TRAV8-6A0A0B4J262 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV8-6A0A0B4J262 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
TRAV8-6A0A0B4J262 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC14.35□□□□□ -0.11
TRAV8-6A0A0B4J262 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
TRAV8-6A0A0B4J262 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
TRAV8-6A0A0B4J262 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
TRAV8-6A0A0B4J262 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC14.35□□□□□ -0.11
TRAV8-6A0A0B4J262 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC14.35□□□□□ -0.11
TRAV8-6A0A0B4J262 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV8-6A0A0B4J262 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
TRAV8-6A0A0B4J262 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC14.35□□□□□ -0.11
TRAV8-6A0A0B4J262 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV8-6A0A0B4J262 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC14.35□□□□□ -0.11
TRAV8-6A0A0B4J262 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV8-6A0A0B4J262 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
TRAV8-6A0A0B4J262 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV8-6A0A0B4J262 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
TRAV8-6A0A0B4J262 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
TRAV8-6A0A0B4J262 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
TRAV8-6A0A0B4J262 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV8-6A0A0B4J262 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV8-6A0A0B4J262 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV8-6A0A0B4J262 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV8-6A0A0B4J262 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV8-6A0A0B4J262 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
TRAV8-6A0A0B4J262 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV8-6A0A0B4J262 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV8-6A0A0B4J262 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV8-6A0A0B4J262 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
TRAV8-6A0A0B4J262 TNRC18P3-201ENST00000441896 2691 ntBASIC14.34□□□□□ -0.11
TRAV8-6A0A0B4J262 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV8-6A0A0B4J262 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TRAV8-6A0A0B4J262 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV8-6A0A0B4J262 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV8-6A0A0B4J262 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV8-6A0A0B4J262 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC14.34□□□□□ -0.11
TRAV8-6A0A0B4J262 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC14.34□□□□□ -0.11
TRAV8-6A0A0B4J262 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV8-6A0A0B4J262 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC14.34□□□□□ -0.11
TRAV8-6A0A0B4J262 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV8-6A0A0B4J262 NAA20-201ENST00000310450 920 ntTSL 2 BASIC14.34□□□□□ -0.11
TRAV8-6A0A0B4J262 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV8-6A0A0B4J262 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
TRAV8-6A0A0B4J262 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV8-6A0A0B4J262 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
TRAV8-6A0A0B4J262 KRT18P5-201ENST00000436075 1291 ntBASIC14.34□□□□□ -0.11
TRAV8-6A0A0B4J262 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC14.34□□□□□ -0.11
TRAV8-6A0A0B4J262 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV8-6A0A0B4J262 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC14.34□□□□□ -0.11
TRAV8-6A0A0B4J262 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV8-6A0A0B4J262 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV8-6A0A0B4J262 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
TRAV8-6A0A0B4J262 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC14.34□□□□□ -0.11
TRAV8-6A0A0B4J262 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV8-6A0A0B4J262 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV8-6A0A0B4J262 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC14.34□□□□□ -0.11
TRAV8-6A0A0B4J262 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV8-6A0A0B4J262 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC14.34□□□□□ -0.11
TRAV8-6A0A0B4J262 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC14.34□□□□□ -0.11
TRAV8-6A0A0B4J262 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
TRAV8-6A0A0B4J262 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV8-6A0A0B4J262 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV8-6A0A0B4J262 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRAV8-6A0A0B4J262 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
TRAV8-6A0A0B4J262 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.11
TRAV8-6A0A0B4J262 BID-203ENST00000399765 1879 ntTSL 2 BASIC14.33□□□□□ -0.11
TRAV8-6A0A0B4J262 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
TRAV8-6A0A0B4J262 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRAV8-6A0A0B4J262 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC14.33□□□□□ -0.11
TRAV8-6A0A0B4J262 AC104581.1-202ENST00000635932 2618 ntBASIC14.33□□□□□ -0.11
TRAV8-6A0A0B4J262 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV8-6A0A0B4J262 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV8-6A0A0B4J262 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC14.33□□□□□ -0.12
TRAV8-6A0A0B4J262 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
TRAV8-6A0A0B4J262 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms