Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 SP2-202ENST00000613139 908 ntTSL 5 BASIC13.6□□□□□ -0.23
TRAV13-1A0A0B4J241 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC13.6□□□□□ -0.23
TRAV13-1A0A0B4J241 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC13.6□□□□□ -0.23
TRAV13-1A0A0B4J241 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC13.6□□□□□ -0.23
TRAV13-1A0A0B4J241 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC13.6□□□□□ -0.23
TRAV13-1A0A0B4J241 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV13-1A0A0B4J241 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV13-1A0A0B4J241 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV13-1A0A0B4J241 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV13-1A0A0B4J241 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC13.6□□□□□ -0.23
TRAV13-1A0A0B4J241 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV13-1A0A0B4J241 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV13-1A0A0B4J241 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV13-1A0A0B4J241 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC13.6□□□□□ -0.23
TRAV13-1A0A0B4J241 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
TRAV13-1A0A0B4J241 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV13-1A0A0B4J241 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV13-1A0A0B4J241 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV13-1A0A0B4J241 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC13.59□□□□□ -0.23
TRAV13-1A0A0B4J241 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC13.59□□□□□ -0.23
TRAV13-1A0A0B4J241 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV13-1A0A0B4J241 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV13-1A0A0B4J241 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV13-1A0A0B4J241 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV13-1A0A0B4J241 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV13-1A0A0B4J241 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV13-1A0A0B4J241 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC13.59□□□□□ -0.23
TRAV13-1A0A0B4J241 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC13.59□□□□□ -0.23
TRAV13-1A0A0B4J241 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV13-1A0A0B4J241 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV13-1A0A0B4J241 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV13-1A0A0B4J241 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV13-1A0A0B4J241 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC13.59□□□□□ -0.23
TRAV13-1A0A0B4J241 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV13-1A0A0B4J241 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV13-1A0A0B4J241 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV13-1A0A0B4J241 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
TRAV13-1A0A0B4J241 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
TRAV13-1A0A0B4J241 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC13.59□□□□□ -0.23
TRAV13-1A0A0B4J241 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC13.59□□□□□ -0.23
TRAV13-1A0A0B4J241 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV13-1A0A0B4J241 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC13.59□□□□□ -0.23
TRAV13-1A0A0B4J241 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV13-1A0A0B4J241 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC13.59□□□□□ -0.23
TRAV13-1A0A0B4J241 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV13-1A0A0B4J241 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV13-1A0A0B4J241 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC13.59□□□□□ -0.23
TRAV13-1A0A0B4J241 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC13.58□□□□□ -0.23
TRAV13-1A0A0B4J241 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
TRAV13-1A0A0B4J241 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
TRAV13-1A0A0B4J241 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
TRAV13-1A0A0B4J241 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
TRAV13-1A0A0B4J241 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV13-1A0A0B4J241 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
TRAV13-1A0A0B4J241 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV13-1A0A0B4J241 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC13.58□□□□□ -0.24
TRAV13-1A0A0B4J241 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC13.58□□□□□ -0.24
TRAV13-1A0A0B4J241 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
TRAV13-1A0A0B4J241 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV13-1A0A0B4J241 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV13-1A0A0B4J241 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC13.58□□□□□ -0.24
TRAV13-1A0A0B4J241 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV13-1A0A0B4J241 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV13-1A0A0B4J241 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV13-1A0A0B4J241 PARP1-202ENST00000366792 553 ntTSL 3 BASIC13.58□□□□□ -0.24
TRAV13-1A0A0B4J241 BMP1-204ENST00000397814 836 ntTSL 4 BASIC13.58□□□□□ -0.24
TRAV13-1A0A0B4J241 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV13-1A0A0B4J241 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
TRAV13-1A0A0B4J241 GALNS-213ENST00000569433 723 ntTSL 3 BASIC13.58□□□□□ -0.24
TRAV13-1A0A0B4J241 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV13-1A0A0B4J241 AL591742.1-201ENST00000604433 565 ntBASIC13.58□□□□□ -0.24
TRAV13-1A0A0B4J241 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV13-1A0A0B4J241 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV13-1A0A0B4J241 CYP21A1P-202ENST00000354927 1481 ntBASIC13.58□□□□□ -0.24
TRAV13-1A0A0B4J241 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC13.58□□□□□ -0.24
TRAV13-1A0A0B4J241 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV13-1A0A0B4J241 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV13-1A0A0B4J241 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
TRAV13-1A0A0B4J241 NFIC-211ENST00000641145 8399 ntBASIC13.58□□□□□ -0.24
TRAV13-1A0A0B4J241 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV13-1A0A0B4J241 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV13-1A0A0B4J241 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV13-1A0A0B4J241 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV13-1A0A0B4J241 AL032819.2-201ENST00000624543 2162 ntBASIC13.58□□□□□ -0.24
TRAV13-1A0A0B4J241 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV13-1A0A0B4J241 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV13-1A0A0B4J241 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV13-1A0A0B4J241 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
TRAV13-1A0A0B4J241 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC13.57□□□□□ -0.24
TRAV13-1A0A0B4J241 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV13-1A0A0B4J241 KRT8P17-201ENST00000453110 1448 ntBASIC13.57□□□□□ -0.24
TRAV13-1A0A0B4J241 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV13-1A0A0B4J241 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV13-1A0A0B4J241 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV13-1A0A0B4J241 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC13.57□□□□□ -0.24
TRAV13-1A0A0B4J241 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV13-1A0A0B4J241 LETM1P2-201ENST00000597330 2178 ntBASIC13.57□□□□□ -0.24
TRAV13-1A0A0B4J241 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV13-1A0A0B4J241 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
TRAV13-1A0A0B4J241 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms