Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
TNFSF12-TNFSF13A0A0A6YY99 TREX1-205ENST00000625293 1783 ntBASIC17.78■□□□□ 0.44
TNFSF12-TNFSF13A0A0A6YY99 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
TNFSF12-TNFSF13A0A0A6YY99 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.78■□□□□ 0.44
TNFSF12-TNFSF13A0A0A6YY99 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.78■□□□□ 0.44
TNFSF12-TNFSF13A0A0A6YY99 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TNFSF12-TNFSF13A0A0A6YY99 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TNFSF12-TNFSF13A0A0A6YY99 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TNFSF12-TNFSF13A0A0A6YY99 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TNFSF12-TNFSF13A0A0A6YY99 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.77■□□□□ 0.44
TNFSF12-TNFSF13A0A0A6YY99 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TNFSF12-TNFSF13A0A0A6YY99 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.77■□□□□ 0.44
TNFSF12-TNFSF13A0A0A6YY99 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TNFSF12-TNFSF13A0A0A6YY99 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TNFSF12-TNFSF13A0A0A6YY99 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
TNFSF12-TNFSF13A0A0A6YY99 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TNFSF12-TNFSF13A0A0A6YY99 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TNFSF12-TNFSF13A0A0A6YY99 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
TNFSF12-TNFSF13A0A0A6YY99 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TNFSF12-TNFSF13A0A0A6YY99 AC239809.2-201ENST00000415381 517 ntBASIC17.77■□□□□ 0.44
TNFSF12-TNFSF13A0A0A6YY99 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.77■□□□□ 0.44
TNFSF12-TNFSF13A0A0A6YY99 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.77■□□□□ 0.44
TNFSF12-TNFSF13A0A0A6YY99 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.44
TNFSF12-TNFSF13A0A0A6YY99 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TNFSF12-TNFSF13A0A0A6YY99 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC17.77■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.77■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 NBPF21P-201ENST00000425093 1451 ntBASIC17.76■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 MIR718-201ENST00000390190 70 ntBASIC17.76■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.76■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.76■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.76■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.76■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.76■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.76■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.75■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.75■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.75■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.75■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.75■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.75■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 KRT18P16-201ENST00000510337 1294 ntBASIC17.75■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.75■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.75■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 Z99916.2-201ENST00000604037 246 ntBASIC17.75■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.75■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.75■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.75■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.74■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.74■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.74■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 KRASP1-201ENST00000407852 552 ntBASIC17.74■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.74■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.74■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms