Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV6-7A0A0A0MS04 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV6-7A0A0A0MS04 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC16.33■□□□□ 0.21
TRBV6-7A0A0A0MS04 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
TRBV6-7A0A0A0MS04 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
TRBV6-7A0A0A0MS04 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TRBV6-7A0A0A0MS04 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRBV6-7A0A0A0MS04 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TRBV6-7A0A0A0MS04 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRBV6-7A0A0A0MS04 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRBV6-7A0A0A0MS04 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.33■□□□□ 0.2
TRBV6-7A0A0A0MS04 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRBV6-7A0A0A0MS04 AC009113.1-201ENST00000570267 2443 ntBASIC16.33■□□□□ 0.2
TRBV6-7A0A0A0MS04 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRBV6-7A0A0A0MS04 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRBV6-7A0A0A0MS04 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRBV6-7A0A0A0MS04 APTR-203ENST00000430801 583 ntTSL 5 BASIC16.33■□□□□ 0.2
TRBV6-7A0A0A0MS04 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRBV6-7A0A0A0MS04 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRBV6-7A0A0A0MS04 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC16.33■□□□□ 0.2
TRBV6-7A0A0A0MS04 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC16.33■□□□□ 0.2
TRBV6-7A0A0A0MS04 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC16.33■□□□□ 0.2
TRBV6-7A0A0A0MS04 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRBV6-7A0A0A0MS04 AC010980.2-201ENST00000587099 1412 ntBASIC16.33■□□□□ 0.2
TRBV6-7A0A0A0MS04 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRBV6-7A0A0A0MS04 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRBV6-7A0A0A0MS04 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
TRBV6-7A0A0A0MS04 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRBV6-7A0A0A0MS04 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRBV6-7A0A0A0MS04 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
TRBV6-7A0A0A0MS04 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRBV6-7A0A0A0MS04 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
TRBV6-7A0A0A0MS04 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.33■□□□□ 0.2
TRBV6-7A0A0A0MS04 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRBV6-7A0A0A0MS04 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
TRBV6-7A0A0A0MS04 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC16.33■□□□□ 0.2
TRBV6-7A0A0A0MS04 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRBV6-7A0A0A0MS04 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.33■□□□□ 0.2
TRBV6-7A0A0A0MS04 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.33■□□□□ 0.2
TRBV6-7A0A0A0MS04 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC16.32■□□□□ 0.2
TRBV6-7A0A0A0MS04 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV6-7A0A0A0MS04 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV6-7A0A0A0MS04 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV6-7A0A0A0MS04 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV6-7A0A0A0MS04 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.32■□□□□ 0.2
TRBV6-7A0A0A0MS04 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV6-7A0A0A0MS04 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV6-7A0A0A0MS04 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV6-7A0A0A0MS04 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV6-7A0A0A0MS04 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC16.32■□□□□ 0.2
TRBV6-7A0A0A0MS04 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TRBV6-7A0A0A0MS04 AC007322.1-201ENST00000426983 750 ntBASIC16.32■□□□□ 0.2
TRBV6-7A0A0A0MS04 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC16.32■□□□□ 0.2
TRBV6-7A0A0A0MS04 HES2-205ENST00000487437 968 ntTSL 3 BASIC16.32■□□□□ 0.2
TRBV6-7A0A0A0MS04 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.32■□□□□ 0.2
TRBV6-7A0A0A0MS04 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV6-7A0A0A0MS04 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.32■□□□□ 0.2
TRBV6-7A0A0A0MS04 BID-214ENST00000617586 542 ntTSL 5 BASIC16.32■□□□□ 0.2
TRBV6-7A0A0A0MS04 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC16.32■□□□□ 0.2
TRBV6-7A0A0A0MS04 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV6-7A0A0A0MS04 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
TRBV6-7A0A0A0MS04 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TRBV6-7A0A0A0MS04 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
TRBV6-7A0A0A0MS04 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV6-7A0A0A0MS04 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV6-7A0A0A0MS04 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV6-7A0A0A0MS04 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV6-7A0A0A0MS04 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TRBV6-7A0A0A0MS04 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TRBV6-7A0A0A0MS04 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV6-7A0A0A0MS04 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV6-7A0A0A0MS04 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV6-7A0A0A0MS04 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.31■□□□□ 0.2
TRBV6-7A0A0A0MS04 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV6-7A0A0A0MS04 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV6-7A0A0A0MS04 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV6-7A0A0A0MS04 ME3-201ENST00000323418 1068 ntTSL 5 BASIC16.31■□□□□ 0.2
TRBV6-7A0A0A0MS04 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
TRBV6-7A0A0A0MS04 AL512625.2-201ENST00000417533 625 ntBASIC16.31■□□□□ 0.2
TRBV6-7A0A0A0MS04 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC16.31■□□□□ 0.2
TRBV6-7A0A0A0MS04 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC16.31■□□□□ 0.2
TRBV6-7A0A0A0MS04 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV6-7A0A0A0MS04 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC16.31■□□□□ 0.2
TRBV6-7A0A0A0MS04 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC16.31■□□□□ 0.2
TRBV6-7A0A0A0MS04 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV6-7A0A0A0MS04 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
TRBV6-7A0A0A0MS04 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV6-7A0A0A0MS04 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV6-7A0A0A0MS04 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV6-7A0A0A0MS04 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.31■□□□□ 0.2
TRBV6-7A0A0A0MS04 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV6-7A0A0A0MS04 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV6-7A0A0A0MS04 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TRBV6-7A0A0A0MS04 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC16.3■□□□□ 0.2
TRBV6-7A0A0A0MS04 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
TRBV6-7A0A0A0MS04 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV6-7A0A0A0MS04 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV6-7A0A0A0MS04 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV6-7A0A0A0MS04 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC16.3■□□□□ 0.2
TRBV6-7A0A0A0MS04 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms