Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.52■□□□□ 0.55
CCDC187A0A096LP49 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CCDC187A0A096LP49 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.51■□□□□ 0.55
CCDC187A0A096LP49 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC187A0A096LP49 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.51■□□□□ 0.55
CCDC187A0A096LP49 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.51■□□□□ 0.55
CCDC187A0A096LP49 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC187A0A096LP49 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC187A0A096LP49 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC187A0A096LP49 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC187A0A096LP49 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC187A0A096LP49 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC187A0A096LP49 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC187A0A096LP49 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.51■□□□□ 0.55
CCDC187A0A096LP49 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.51■□□□□ 0.55
CCDC187A0A096LP49 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.51■□□□□ 0.55
CCDC187A0A096LP49 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC18.51■□□□□ 0.55
CCDC187A0A096LP49 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC187A0A096LP49 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CCDC187A0A096LP49 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
CCDC187A0A096LP49 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC187A0A096LP49 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC187A0A096LP49 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.51■□□□□ 0.55
CCDC187A0A096LP49 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
CCDC187A0A096LP49 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.5■□□□□ 0.55
CCDC187A0A096LP49 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC187A0A096LP49 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.5■□□□□ 0.55
CCDC187A0A096LP49 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC187A0A096LP49 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC187A0A096LP49 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.5■□□□□ 0.55
CCDC187A0A096LP49 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC187A0A096LP49 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CCDC187A0A096LP49 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.5■□□□□ 0.55
CCDC187A0A096LP49 CA15P1-201ENST00000481698 905 ntBASIC18.5■□□□□ 0.55
CCDC187A0A096LP49 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC187A0A096LP49 AL353719.1-201ENST00000566847 864 ntBASIC18.5■□□□□ 0.55
CCDC187A0A096LP49 AL160286.2-201ENST00000567150 934 ntBASIC18.5■□□□□ 0.55
CCDC187A0A096LP49 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.5■□□□□ 0.55
CCDC187A0A096LP49 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.5■□□□□ 0.55
CCDC187A0A096LP49 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CCDC187A0A096LP49 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.5■□□□□ 0.55
CCDC187A0A096LP49 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.5■□□□□ 0.55
CCDC187A0A096LP49 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC187A0A096LP49 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC187A0A096LP49 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC187A0A096LP49 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC187A0A096LP49 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC187A0A096LP49 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CCDC187A0A096LP49 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC187A0A096LP49 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.5■□□□□ 0.55
CCDC187A0A096LP49 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC187A0A096LP49 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.5■□□□□ 0.55
CCDC187A0A096LP49 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CCDC187A0A096LP49 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC187A0A096LP49 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC187A0A096LP49 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CCDC187A0A096LP49 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC187A0A096LP49 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC187A0A096LP49 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC187A0A096LP49 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC187A0A096LP49 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.49■□□□□ 0.55
CCDC187A0A096LP49 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.49■□□□□ 0.55
CCDC187A0A096LP49 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.49■□□□□ 0.55
CCDC187A0A096LP49 HOMER2P1-201ENST00000455653 964 ntBASIC18.49■□□□□ 0.55
CCDC187A0A096LP49 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC187A0A096LP49 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC187A0A096LP49 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC187A0A096LP49 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.49■□□□□ 0.55
CCDC187A0A096LP49 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CCDC187A0A096LP49 AC011558.1-201ENST00000623459 338 ntBASIC18.49■□□□□ 0.55
CCDC187A0A096LP49 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.49■□□□□ 0.55
CCDC187A0A096LP49 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.49■□□□□ 0.55
CCDC187A0A096LP49 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC187A0A096LP49 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC187A0A096LP49 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC187A0A096LP49 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC187A0A096LP49 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC187A0A096LP49 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC187A0A096LP49 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC187A0A096LP49 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC187A0A096LP49 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.48■□□□□ 0.55
CCDC187A0A096LP49 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
CCDC187A0A096LP49 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.48■□□□□ 0.55
CCDC187A0A096LP49 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC187A0A096LP49 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC187A0A096LP49 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC187A0A096LP49 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC187A0A096LP49 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.48■□□□□ 0.55
CCDC187A0A096LP49 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC187A0A096LP49 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.48■□□□□ 0.55
CCDC187A0A096LP49 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.48■□□□□ 0.55
CCDC187A0A096LP49 AL121956.5-201ENST00000625261 221 ntBASIC18.48■□□□□ 0.55
CCDC187A0A096LP49 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC187A0A096LP49 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC187A0A096LP49 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC187A0A096LP49 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC187A0A096LP49 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC187A0A096LP49 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.47■□□□□ 0.55
CCDC187A0A096LP49 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC187A0A096LP49 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms