Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.67■□□□□ 0.42
TRAV27A0A087WT01 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
TRAV27A0A087WT01 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
TRAV27A0A087WT01 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.67■□□□□ 0.42
TRAV27A0A087WT01 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV27A0A087WT01 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV27A0A087WT01 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV27A0A087WT01 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV27A0A087WT01 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV27A0A087WT01 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV27A0A087WT01 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV27A0A087WT01 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV27A0A087WT01 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV27A0A087WT01 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV27A0A087WT01 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV27A0A087WT01 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV27A0A087WT01 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
TRAV27A0A087WT01 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV27A0A087WT01 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV27A0A087WT01 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV27A0A087WT01 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV27A0A087WT01 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.66■□□□□ 0.42
TRAV27A0A087WT01 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV27A0A087WT01 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV27A0A087WT01 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV27A0A087WT01 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV27A0A087WT01 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TRAV27A0A087WT01 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC17.66■□□□□ 0.42
TRAV27A0A087WT01 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.66■□□□□ 0.42
TRAV27A0A087WT01 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC17.66■□□□□ 0.42
TRAV27A0A087WT01 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV27A0A087WT01 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.66■□□□□ 0.42
TRAV27A0A087WT01 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV27A0A087WT01 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
TRAV27A0A087WT01 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC17.66■□□□□ 0.42
TRAV27A0A087WT01 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC17.66■□□□□ 0.42
TRAV27A0A087WT01 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC17.66■□□□□ 0.42
TRAV27A0A087WT01 WT1-AS_3.1-201ENST00000613262 234 ntBASIC17.66■□□□□ 0.42
TRAV27A0A087WT01 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV27A0A087WT01 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
TRAV27A0A087WT01 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV27A0A087WT01 AC006557.6-201ENST00000623071 864 ntBASIC17.66■□□□□ 0.42
TRAV27A0A087WT01 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.66■□□□□ 0.42
TRAV27A0A087WT01 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV27A0A087WT01 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.66■□□□□ 0.42
TRAV27A0A087WT01 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV27A0A087WT01 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV27A0A087WT01 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV27A0A087WT01 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
TRAV27A0A087WT01 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.66■□□□□ 0.42
TRAV27A0A087WT01 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.66■□□□□ 0.42
TRAV27A0A087WT01 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV27A0A087WT01 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV27A0A087WT01 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV27A0A087WT01 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.66■□□□□ 0.42
TRAV27A0A087WT01 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.66■□□□□ 0.42
TRAV27A0A087WT01 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
TRAV27A0A087WT01 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.65■□□□□ 0.42
TRAV27A0A087WT01 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV27A0A087WT01 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV27A0A087WT01 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.65■□□□□ 0.42
TRAV27A0A087WT01 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV27A0A087WT01 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
TRAV27A0A087WT01 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.65■□□□□ 0.42
TRAV27A0A087WT01 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV27A0A087WT01 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV27A0A087WT01 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.65■□□□□ 0.42
TRAV27A0A087WT01 AC073210.2-201ENST00000430369 194 ntBASIC17.65■□□□□ 0.42
TRAV27A0A087WT01 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC17.65■□□□□ 0.42
TRAV27A0A087WT01 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.65■□□□□ 0.42
TRAV27A0A087WT01 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.65■□□□□ 0.42
TRAV27A0A087WT01 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV27A0A087WT01 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
TRAV27A0A087WT01 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV27A0A087WT01 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.65■□□□□ 0.42
TRAV27A0A087WT01 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.65■□□□□ 0.42
TRAV27A0A087WT01 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
TRAV27A0A087WT01 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV27A0A087WT01 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV27A0A087WT01 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV27A0A087WT01 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV27A0A087WT01 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV27A0A087WT01 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV27A0A087WT01 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV27A0A087WT01 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV27A0A087WT01 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TRAV27A0A087WT01 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.64■□□□□ 0.41
TRAV27A0A087WT01 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
TRAV27A0A087WT01 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
TRAV27A0A087WT01 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV27A0A087WT01 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
TRAV27A0A087WT01 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV27A0A087WT01 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
TRAV27A0A087WT01 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV27A0A087WT01 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.64■□□□□ 0.41
TRAV27A0A087WT01 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV27A0A087WT01 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV27A0A087WT01 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
TRAV27A0A087WT01 AC091874.3-201ENST00000512672 1195 ntBASIC17.64■□□□□ 0.41
TRAV27A0A087WT01 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms