Protein–RNA interactions for Protein: Q99325

ATG40, Autophagy-related protein 40, yeastyeast

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ATG40Q99325 DUS3YLR401C 2007 nt6.81□□□□□ -1.32
ATG40Q99325 PAU19YMR325W 375 nt6.81□□□□□ -1.32
ATG40Q99325 HIS3YOR202W 663 nt6.81□□□□□ -1.32
ATG40Q99325 OLA1YBR025C 1185 nt6.81□□□□□ -1.32
ATG40Q99325 SRM1YGL097W 1449 nt6.81□□□□□ -1.32
ATG40Q99325 ERO1YML130C 1692 nt6.81□□□□□ -1.32
ATG40Q99325 SER2YGR208W 930 nt6.79□□□□□ -1.32
ATG40Q99325 HTS1YPR033C 1641 nt6.78□□□□□ -1.32
ATG40Q99325 MET22YOL064C 1074 nt6.77□□□□□ -1.33
ATG40Q99325 YMR166CYMR166C 1107 nt6.76□□□□□ -1.33
ATG40Q99325 NDE2YDL085W 1638 nt6.76□□□□□ -1.33
ATG40Q99325 MEP1YGR121C 1479 nt6.75□□□□□ -1.33
ATG40Q99325 BUD31YCR063W 474 nt6.75□□□□□ -1.33
ATG40Q99325 RNA170RNA170 169 nt6.75□□□□□ -1.33
ATG40Q99325 DIA4YHR011W 1341 nt6.75□□□□□ -1.33
ATG40Q99325 ABP1YCR088W 1779 nt6.74□□□□□ -1.33
ATG40Q99325 PFS2YNL317W 1398 nt6.74□□□□□ -1.33
ATG40Q99325 FTH1YBR207W 1398 nt6.74□□□□□ -1.33
ATG40Q99325 OCH1YGL038C 1443 nt6.74□□□□□ -1.33
ATG40Q99325 PDC6YGR087C 1692 nt6.74□□□□□ -1.33
ATG40Q99325 FRA1YLL029W 2250 nt6.74□□□□□ -1.33
ATG40Q99325 TIF3YPR163C 1311 nt6.74□□□□□ -1.33
ATG40Q99325 TDA4YJR116W 840 nt6.73□□□□□ -1.33
ATG40Q99325 RCF1YML030W 480 nt6.73□□□□□ -1.33
ATG40Q99325 HSV2YGR223C 1347 nt6.73□□□□□ -1.33
ATG40Q99325 YGR210CYGR210C 1236 nt6.72□□□□□ -1.33
ATG40Q99325 YNL140CYNL140C 570 nt6.72□□□□□ -1.33
ATG40Q99325 TGL5YOR081C 2250 nt6.71□□□□□ -1.33
ATG40Q99325 EHT1YBR177C 1356 nt6.71□□□□□ -1.33
ATG40Q99325 GLY1YEL046C 1164 nt6.71□□□□□ -1.34
ATG40Q99325 CAK1YFL029C 1107 nt6.71□□□□□ -1.34
ATG40Q99325 YGR137WYGR137W 375 nt6.71□□□□□ -1.34
ATG40Q99325 INM1YHR046C 888 nt6.71□□□□□ -1.34
ATG40Q99325 YPL108WYPL108W 507 nt6.71□□□□□ -1.34
ATG40Q99325 MET30YIL046W 1923 nt6.7□□□□□ -1.34
ATG40Q99325 INO1YJL153C 1602 nt6.7□□□□□ -1.34
ATG40Q99325 RRT14YIL127C 621 nt6.7□□□□□ -1.34
ATG40Q99325 LRO1YNR008W 1986 nt6.69□□□□□ -1.34
ATG40Q99325 YRF1-1YDR545W 5391 nt6.69□□□□□ -1.34
ATG40Q99325 YRF1-5YLR467W 5391 nt6.69□□□□□ -1.34
ATG40Q99325 YRF1-8YOR396W 5391 nt6.69□□□□□ -1.34
ATG40Q99325 WSC3YOL105C 1671 nt6.69□□□□□ -1.34
ATG40Q99325 YCP4YCR004C 744 nt6.69□□□□□ -1.34
ATG40Q99325 NSG2YNL156C 900 nt6.69□□□□□ -1.34
ATG40Q99325 YNL190WYNL190W 615 nt6.69□□□□□ -1.34
ATG40Q99325 MDH2YOL126C 1134 nt6.69□□□□□ -1.34
ATG40Q99325 PUP3YER094C 618 nt6.68□□□□□ -1.34
ATG40Q99325 PUP1YOR157C 786 nt6.68□□□□□ -1.34
ATG40Q99325 RHO1YPR165W 630 nt6.68□□□□□ -1.34
ATG40Q99325 DIP5YPL265W 1827 nt6.67□□□□□ -1.34
ATG40Q99325 TGA1tA(UGC)A 73 nt6.67□□□□□ -1.34
ATG40Q99325 tA(UGC)EtA(UGC)E 73 nt6.67□□□□□ -1.34
ATG40Q99325 tA(UGC)GtA(UGC)G 73 nt6.67□□□□□ -1.34
ATG40Q99325 tA(UGC)LtA(UGC)L 73 nt6.67□□□□□ -1.34
ATG40Q99325 tA(UGC)OtA(UGC)O 73 nt6.67□□□□□ -1.34
ATG40Q99325 SWM1YDR260C 513 nt6.67□□□□□ -1.34
ATG40Q99325 SLM3YDL033C 1254 nt6.66□□□□□ -1.34
ATG40Q99325 LSP1YPL004C 1026 nt6.66□□□□□ -1.34
ATG40Q99325 YPT31YER031C 672 nt6.65□□□□□ -1.34
ATG40Q99325 SAM50YNL026W 1455 nt6.65□□□□□ -1.35
ATG40Q99325 THI73YLR004C 1572 nt6.64□□□□□ -1.35
ATG40Q99325 YHL030W-AYHL030W-A 462 nt6.63□□□□□ -1.35
ATG40Q99325 YMR007WYMR007W 381 nt6.63□□□□□ -1.35
ATG40Q99325 MRN1YPL184C 1839 nt6.63□□□□□ -1.35
ATG40Q99325 LAS17YOR181W 1902 nt6.62□□□□□ -1.35
ATG40Q99325 RSC4YKR008W 1878 nt6.62□□□□□ -1.35
ATG40Q99325 FCY1YPR062W 477 nt6.62□□□□□ -1.35
ATG40Q99325 MRP7YNL005C 1116 nt6.61□□□□□ -1.35
ATG40Q99325 SLG1YOR008C 1137 nt6.61□□□□□ -1.35
ATG40Q99325 RCR1YBR005W 642 nt6.61□□□□□ -1.35
ATG40Q99325 KTR4YBR199W 1395 nt6.6□□□□□ -1.35
ATG40Q99325 WSC4YHL028W 1818 nt6.6□□□□□ -1.35
ATG40Q99325 PMU1YKL128C 888 nt6.6□□□□□ -1.35
ATG40Q99325 PRE10YOR362C 867 nt6.6□□□□□ -1.35
ATG40Q99325 YPL264CYPL264C 1062 nt6.6□□□□□ -1.35
ATG40Q99325 SHC1YER096W 1539 nt6.6□□□□□ -1.35
ATG40Q99325 RTG2YGL252C 1767 nt6.59□□□□□ -1.35
ATG40Q99325 YPR084WYPR084W 1371 nt6.59□□□□□ -1.35
ATG40Q99325 ALG7YBR243C 1347 nt6.59□□□□□ -1.35
ATG40Q99325 YER156CYER156C 1017 nt6.59□□□□□ -1.35
ATG40Q99325 RPL2AYFR031C-A 765 nt6.59□□□□□ -1.35
ATG40Q99325 HXT8YJL214W 1710 nt6.59□□□□□ -1.36
ATG40Q99325 TIM50YPL063W 1431 nt6.59□□□□□ -1.36
ATG40Q99325 ARO3YDR035W 1113 nt6.58□□□□□ -1.36
ATG40Q99325 YJL160CYJL160C 864 nt6.58□□□□□ -1.36
ATG40Q99325 AIM34YMR003W 597 nt6.58□□□□□ -1.36
ATG40Q99325 YMR206WYMR206W 942 nt6.58□□□□□ -1.36
ATG40Q99325 CHA1YCL064C 1083 nt6.57□□□□□ -1.36
ATG40Q99325 ATP10YLR393W 840 nt6.57□□□□□ -1.36
ATG40Q99325 SPE4YLR146C 903 nt6.56□□□□□ -1.36
ATG40Q99325 BXI1YNL305C 894 nt6.56□□□□□ -1.36
ATG40Q99325 YEL034C-AYEL034C-A 603 nt6.55□□□□□ -1.36
ATG40Q99325 ERG6YML008C 1152 nt6.55□□□□□ -1.36
ATG40Q99325 PET18YCR020C 648 nt6.54□□□□□ -1.36
ATG40Q99325 RPS6AYPL090C 711 nt6.54□□□□□ -1.36
ATG40Q99325 RPS6BYBR181C 711 nt6.54□□□□□ -1.36
ATG40Q99325 YLR173WYLR173W 1827 nt6.54□□□□□ -1.36
ATG40Q99325 ATP2YJR121W 1536 nt6.54□□□□□ -1.36
ATG40Q99325 ARG7YMR062C 1326 nt6.53□□□□□ -1.36
ATG40Q99325 FRT1YOR324C 1809 nt6.53□□□□□ -1.36
Retrieved 100 of 7,029 protein–RNA pairs in 18.5 ms