Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 AC091060.1-201ENST00000623524 1766 ntBASIC20.2■□□□□ 0.82
MBD3L1Q8WWY6 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
MBD3L1Q8WWY6 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
MBD3L1Q8WWY6 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC20.2■□□□□ 0.82
MBD3L1Q8WWY6 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.19■□□□□ 0.82
MBD3L1Q8WWY6 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.19■□□□□ 0.82
MBD3L1Q8WWY6 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MBD3L1Q8WWY6 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MBD3L1Q8WWY6 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.18■□□□□ 0.82
MBD3L1Q8WWY6 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
MBD3L1Q8WWY6 AP004833.2-201ENST00000532228 1454 ntBASIC20.17■□□□□ 0.82
MBD3L1Q8WWY6 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
MBD3L1Q8WWY6 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.16■□□□□ 0.82
MBD3L1Q8WWY6 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MBD3L1Q8WWY6 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC20.16■□□□□ 0.82
MBD3L1Q8WWY6 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
MBD3L1Q8WWY6 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC20.16■□□□□ 0.82
MBD3L1Q8WWY6 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
MBD3L1Q8WWY6 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
MBD3L1Q8WWY6 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MBD3L1Q8WWY6 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC20.14■□□□□ 0.82
MBD3L1Q8WWY6 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
MBD3L1Q8WWY6 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.14■□□□□ 0.82
MBD3L1Q8WWY6 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
MBD3L1Q8WWY6 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
MBD3L1Q8WWY6 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC20.13■□□□□ 0.81
MBD3L1Q8WWY6 AC010864.1-201ENST00000609407 1511 ntBASIC20.13■□□□□ 0.81
MBD3L1Q8WWY6 EBPL-203ENST00000378270 579 ntTSL 2 BASIC20.13■□□□□ 0.81
MBD3L1Q8WWY6 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.12■□□□□ 0.81
MBD3L1Q8WWY6 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.12■□□□□ 0.81
MBD3L1Q8WWY6 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
MBD3L1Q8WWY6 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
MBD3L1Q8WWY6 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.11■□□□□ 0.81
MBD3L1Q8WWY6 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
MBD3L1Q8WWY6 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC20.11■□□□□ 0.81
MBD3L1Q8WWY6 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
MBD3L1Q8WWY6 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
MBD3L1Q8WWY6 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC20.11■□□□□ 0.81
MBD3L1Q8WWY6 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
MBD3L1Q8WWY6 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
MBD3L1Q8WWY6 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
MBD3L1Q8WWY6 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
MBD3L1Q8WWY6 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.11■□□□□ 0.81
MBD3L1Q8WWY6 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
MBD3L1Q8WWY6 AC020928.2-201ENST00000588717 2197 ntBASIC20.1■□□□□ 0.81
MBD3L1Q8WWY6 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.1■□□□□ 0.81
MBD3L1Q8WWY6 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC20.1■□□□□ 0.81
MBD3L1Q8WWY6 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
MBD3L1Q8WWY6 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
MBD3L1Q8WWY6 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MBD3L1Q8WWY6 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
MBD3L1Q8WWY6 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
MBD3L1Q8WWY6 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.8
MBD3L1Q8WWY6 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
MBD3L1Q8WWY6 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC20.08■□□□□ 0.8
MBD3L1Q8WWY6 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
MBD3L1Q8WWY6 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
MBD3L1Q8WWY6 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
MBD3L1Q8WWY6 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MBD3L1Q8WWY6 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
MBD3L1Q8WWY6 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
MBD3L1Q8WWY6 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MBD3L1Q8WWY6 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.06■□□□□ 0.8
MBD3L1Q8WWY6 AC145676.1-201ENST00000514988 2004 ntBASIC20.05■□□□□ 0.8
MBD3L1Q8WWY6 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MBD3L1Q8WWY6 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MBD3L1Q8WWY6 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
MBD3L1Q8WWY6 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MBD3L1Q8WWY6 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
MBD3L1Q8WWY6 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
MBD3L1Q8WWY6 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
MBD3L1Q8WWY6 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
MBD3L1Q8WWY6 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
MBD3L1Q8WWY6 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
MBD3L1Q8WWY6 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MBD3L1Q8WWY6 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MBD3L1Q8WWY6 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MBD3L1Q8WWY6 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.03■□□□□ 0.8
MBD3L1Q8WWY6 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
MBD3L1Q8WWY6 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
MBD3L1Q8WWY6 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.01■□□□□ 0.79
MBD3L1Q8WWY6 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MBD3L1Q8WWY6 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MBD3L1Q8WWY6 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MBD3L1Q8WWY6 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.01■□□□□ 0.79
MBD3L1Q8WWY6 AC093323.1-202ENST00000635031 2045 ntBASIC20■□□□□ 0.79
MBD3L1Q8WWY6 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20■□□□□ 0.79
MBD3L1Q8WWY6 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
MBD3L1Q8WWY6 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
MBD3L1Q8WWY6 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
MBD3L1Q8WWY6 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
MBD3L1Q8WWY6 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC19.99■□□□□ 0.79
MBD3L1Q8WWY6 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
MBD3L1Q8WWY6 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
MBD3L1Q8WWY6 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
MBD3L1Q8WWY6 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
MBD3L1Q8WWY6 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC19.99■□□□□ 0.79
MBD3L1Q8WWY6 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
MBD3L1Q8WWY6 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC19.98■□□□□ 0.79
MBD3L1Q8WWY6 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms