Protein–RNA interactions for Protein: Q8NHU3

SGMS2, Phosphatidylcholine:ceramide cholinephosphotransferase 2, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS2Q8NHU3 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SGMS2Q8NHU3 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SGMS2Q8NHU3 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC20.9■□□□□ 0.94
SGMS2Q8NHU3 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.9■□□□□ 0.94
SGMS2Q8NHU3 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC20.9■□□□□ 0.94
SGMS2Q8NHU3 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SGMS2Q8NHU3 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SGMS2Q8NHU3 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SGMS2Q8NHU3 AL135925.1-201ENST00000605920 1701 ntBASIC20.9■□□□□ 0.94
SGMS2Q8NHU3 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SGMS2Q8NHU3 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SGMS2Q8NHU3 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SGMS2Q8NHU3 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC20.89■□□□□ 0.93
SGMS2Q8NHU3 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
SGMS2Q8NHU3 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC20.88■□□□□ 0.93
SGMS2Q8NHU3 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
SGMS2Q8NHU3 MIR6090-201ENST00000622481 60 ntBASIC20.87■□□□□ 0.93
SGMS2Q8NHU3 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
SGMS2Q8NHU3 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
SGMS2Q8NHU3 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC20.86■□□□□ 0.93
SGMS2Q8NHU3 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SGMS2Q8NHU3 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SGMS2Q8NHU3 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC20.85■□□□□ 0.93
SGMS2Q8NHU3 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SGMS2Q8NHU3 METRNL-202ENST00000570778 967 ntTSL 5 BASIC20.85■□□□□ 0.93
SGMS2Q8NHU3 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC20.85■□□□□ 0.93
SGMS2Q8NHU3 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.84■□□□□ 0.93
SGMS2Q8NHU3 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC20.84■□□□□ 0.93
SGMS2Q8NHU3 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
SGMS2Q8NHU3 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
SGMS2Q8NHU3 ST7-AS1-201ENST00000456775 1889 ntBASIC20.83■□□□□ 0.92
SGMS2Q8NHU3 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SGMS2Q8NHU3 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
SGMS2Q8NHU3 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SGMS2Q8NHU3 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SGMS2Q8NHU3 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
SGMS2Q8NHU3 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SGMS2Q8NHU3 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC20.82■□□□□ 0.92
SGMS2Q8NHU3 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
SGMS2Q8NHU3 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SGMS2Q8NHU3 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SGMS2Q8NHU3 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SGMS2Q8NHU3 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
SGMS2Q8NHU3 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC20.81■□□□□ 0.92
SGMS2Q8NHU3 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
SGMS2Q8NHU3 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SGMS2Q8NHU3 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SGMS2Q8NHU3 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SGMS2Q8NHU3 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SGMS2Q8NHU3 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SGMS2Q8NHU3 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SGMS2Q8NHU3 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC20.8■□□□□ 0.92
SGMS2Q8NHU3 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SGMS2Q8NHU3 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SGMS2Q8NHU3 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SGMS2Q8NHU3 AC010864.1-201ENST00000609407 1511 ntBASIC20.79■□□□□ 0.92
SGMS2Q8NHU3 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
SGMS2Q8NHU3 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
SGMS2Q8NHU3 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SGMS2Q8NHU3 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SGMS2Q8NHU3 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SGMS2Q8NHU3 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SGMS2Q8NHU3 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SGMS2Q8NHU3 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SGMS2Q8NHU3 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SGMS2Q8NHU3 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SGMS2Q8NHU3 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SGMS2Q8NHU3 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SGMS2Q8NHU3 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SGMS2Q8NHU3 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SGMS2Q8NHU3 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SGMS2Q8NHU3 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SGMS2Q8NHU3 DUX4L13-201ENST00000554103 1267 ntBASIC20.78■□□□□ 0.92
SGMS2Q8NHU3 DUX4L15-201ENST00000611059 1267 ntBASIC20.78■□□□□ 0.92
SGMS2Q8NHU3 DUX4L23-201ENST00000615195 1269 ntBASIC20.78■□□□□ 0.92
SGMS2Q8NHU3 DUX4L24-201ENST00000617576 1269 ntBASIC20.78■□□□□ 0.92
SGMS2Q8NHU3 DUX4L22-201ENST00000618238 1269 ntBASIC20.78■□□□□ 0.92
SGMS2Q8NHU3 DUX4L20-201ENST00000619712 1269 ntBASIC20.78■□□□□ 0.92
SGMS2Q8NHU3 DUX4L21-201ENST00000622058 1269 ntBASIC20.78■□□□□ 0.92
SGMS2Q8NHU3 DUX4L10-201ENST00000622460 1267 ntBASIC20.78■□□□□ 0.92
SGMS2Q8NHU3 DUX4L25-201ENST00000624915 1269 ntBASIC20.78■□□□□ 0.92
SGMS2Q8NHU3 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SGMS2Q8NHU3 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SGMS2Q8NHU3 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SGMS2Q8NHU3 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SGMS2Q8NHU3 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.91
SGMS2Q8NHU3 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
SGMS2Q8NHU3 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SGMS2Q8NHU3 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SGMS2Q8NHU3 SRP68-213ENST00000629930 165 ntTSL 5 BASIC20.76■□□□□ 0.91
SGMS2Q8NHU3 RNF126P1-201ENST00000567452 1320 ntBASIC20.76■□□□□ 0.91
SGMS2Q8NHU3 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
SGMS2Q8NHU3 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SGMS2Q8NHU3 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC20.75■□□□□ 0.91
SGMS2Q8NHU3 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.75■□□□□ 0.91
SGMS2Q8NHU3 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC20.75■□□□□ 0.91
SGMS2Q8NHU3 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SGMS2Q8NHU3 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
SGMS2Q8NHU3 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SGMS2Q8NHU3 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms