Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC40.93■■■■■ 4.14
CFAP43Q8NDM7 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC40.93■■■■■ 4.14
CFAP43Q8NDM7 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC40.93■■■■■ 4.14
CFAP43Q8NDM7 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC40.92■■■■■ 4.14
CFAP43Q8NDM7 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC40.92■■■■■ 4.14
CFAP43Q8NDM7 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC40.92■■■■■ 4.14
CFAP43Q8NDM7 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC40.91■■■■■ 4.14
CFAP43Q8NDM7 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC40.91■■■■■ 4.14
CFAP43Q8NDM7 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC40.91■■■■■ 4.14
CFAP43Q8NDM7 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC40.91■■■■■ 4.14
CFAP43Q8NDM7 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC40.89■■■■■ 4.14
CFAP43Q8NDM7 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC40.88■■■■■ 4.14
CFAP43Q8NDM7 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC40.88■■■■■ 4.13
CFAP43Q8NDM7 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC40.88■■■■■ 4.13
CFAP43Q8NDM7 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC40.87■■■■■ 4.13
CFAP43Q8NDM7 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC40.85■■■■■ 4.13
CFAP43Q8NDM7 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC40.85■■■■■ 4.13
CFAP43Q8NDM7 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC40.85■■■■■ 4.13
CFAP43Q8NDM7 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC40.85■■■■■ 4.13
CFAP43Q8NDM7 AC008813.1-201ENST00000536597 885 ntBASIC40.85■■■■■ 4.13
CFAP43Q8NDM7 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC40.84■■■■■ 4.13
CFAP43Q8NDM7 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC40.84■■■■■ 4.13
CFAP43Q8NDM7 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC40.83■■■■■ 4.13
CFAP43Q8NDM7 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC40.83■■■■■ 4.13
CFAP43Q8NDM7 AL135925.1-201ENST00000605920 1701 ntBASIC40.83■■■■■ 4.13
CFAP43Q8NDM7 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC40.82■■■■■ 4.12
CFAP43Q8NDM7 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC40.82■■■■■ 4.12
CFAP43Q8NDM7 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC40.82■■■■■ 4.12
CFAP43Q8NDM7 HES4-202ENST00000428771 1040 ntTSL 2 BASIC40.81■■■■■ 4.12
CFAP43Q8NDM7 AC018358.1-201ENST00000631079 1402 ntBASIC40.8■■■■■ 4.12
CFAP43Q8NDM7 AL033527.3-201ENST00000566366 1196 ntBASIC40.79■■■■■ 4.12
CFAP43Q8NDM7 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC40.79■■■■■ 4.12
CFAP43Q8NDM7 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC40.79■■■■■ 4.12
CFAP43Q8NDM7 AC022413.1-201ENST00000624602 984 ntBASIC40.78■■■■■ 4.12
CFAP43Q8NDM7 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC40.78■■■■■ 4.12
CFAP43Q8NDM7 GFER-205ENST00000569451 517 ntTSL 5 BASIC40.78■■■■■ 4.12
CFAP43Q8NDM7 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC40.78■■■■■ 4.12
CFAP43Q8NDM7 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC40.77■■■■■ 4.12
CFAP43Q8NDM7 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC40.77■■■■■ 4.12
CFAP43Q8NDM7 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC40.77■■■■■ 4.12
CFAP43Q8NDM7 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC40.77■■■■■ 4.12
CFAP43Q8NDM7 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC40.76■■■■■ 4.12
CFAP43Q8NDM7 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC40.76■■■■■ 4.12
CFAP43Q8NDM7 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC40.75■■■■■ 4.11
CFAP43Q8NDM7 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC40.74■■■■■ 4.11
CFAP43Q8NDM7 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC40.74■■■■■ 4.11
CFAP43Q8NDM7 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC40.74■■■■■ 4.11
CFAP43Q8NDM7 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC40.73■■■■■ 4.11
CFAP43Q8NDM7 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC40.72■■■■■ 4.11
CFAP43Q8NDM7 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC40.72■■■■■ 4.11
CFAP43Q8NDM7 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC40.72■■■■■ 4.11
CFAP43Q8NDM7 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC40.72■■■■■ 4.11
CFAP43Q8NDM7 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC40.7■■■■■ 4.11
CFAP43Q8NDM7 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC40.7■■■■■ 4.11
CFAP43Q8NDM7 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC40.7■■■■■ 4.11
CFAP43Q8NDM7 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC40.69■■■■■ 4.1
CFAP43Q8NDM7 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC40.69■■■■■ 4.1
CFAP43Q8NDM7 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC40.68■■■■■ 4.1
CFAP43Q8NDM7 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC40.67■■■■■ 4.1
CFAP43Q8NDM7 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC40.66■■■■■ 4.1
CFAP43Q8NDM7 AC127502.1-201ENST00000399971 1502 ntBASIC40.65■■■■■ 4.1
CFAP43Q8NDM7 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC40.65■■■■■ 4.1
CFAP43Q8NDM7 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC40.64■■■■■ 4.1
CFAP43Q8NDM7 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC40.64■■■■■ 4.1
CFAP43Q8NDM7 U85056.1-201ENST00000616429 682 ntBASIC40.63■■■■■ 4.1
CFAP43Q8NDM7 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC40.63■■■■■ 4.09
CFAP43Q8NDM7 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC40.62■■■■■ 4.09
CFAP43Q8NDM7 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC40.62■■■■■ 4.09
CFAP43Q8NDM7 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC40.61■■■■■ 4.09
CFAP43Q8NDM7 HYI-213ENST00000583037 1322 ntTSL 5 BASIC40.6■■■■■ 4.09
CFAP43Q8NDM7 AC135983.2-203ENST00000454486 1613 ntBASIC40.6■■■■■ 4.09
CFAP43Q8NDM7 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC40.59■■■■■ 4.09
CFAP43Q8NDM7 WHAMMP2-203ENST00000563942 1603 ntBASIC40.58■■■■■ 4.09
CFAP43Q8NDM7 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC40.57■■■■■ 4.08
CFAP43Q8NDM7 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC40.56■■■■■ 4.08
CFAP43Q8NDM7 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC40.56■■■■■ 4.08
CFAP43Q8NDM7 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC40.56■■■■■ 4.08
CFAP43Q8NDM7 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC40.56■■■■■ 4.08
CFAP43Q8NDM7 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC40.56■■■■■ 4.08
CFAP43Q8NDM7 AC060814.1-201ENST00000554326 538 ntBASIC40.56■■■■■ 4.08
CFAP43Q8NDM7 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC40.55■■■■■ 4.08
CFAP43Q8NDM7 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC40.55■■■■■ 4.08
CFAP43Q8NDM7 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC40.55■■■■■ 4.08
CFAP43Q8NDM7 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC40.55■■■■■ 4.08
CFAP43Q8NDM7 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC40.54■■■■■ 4.08
CFAP43Q8NDM7 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC40.54■■■■■ 4.08
CFAP43Q8NDM7 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC40.53■■■■■ 4.08
CFAP43Q8NDM7 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC40.53■■■■■ 4.08
CFAP43Q8NDM7 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC40.53■■■■■ 4.08
CFAP43Q8NDM7 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC40.52■■■■■ 4.08
CFAP43Q8NDM7 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC40.52■■■■■ 4.08
CFAP43Q8NDM7 KRT18P60-201ENST00000312876 1297 ntBASIC40.51■■■■■ 4.08
CFAP43Q8NDM7 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC40.51■■■■■ 4.08
CFAP43Q8NDM7 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC40.5■■■■■ 4.07
CFAP43Q8NDM7 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC40.5■■■■■ 4.07
CFAP43Q8NDM7 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC40.49■■■■■ 4.07
CFAP43Q8NDM7 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC40.49■■■■■ 4.07
CFAP43Q8NDM7 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC40.48■■■■■ 4.07
CFAP43Q8NDM7 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC40.48■■■■■ 4.07
CFAP43Q8NDM7 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC40.48■■■■■ 4.07
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms