Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 DUX4L23-201ENST00000615195 1269 ntBASIC26.95■■□□□ 1.9
SCML4Q8N228 DUX4L24-201ENST00000617576 1269 ntBASIC26.95■■□□□ 1.9
SCML4Q8N228 DUX4L22-201ENST00000618238 1269 ntBASIC26.95■■□□□ 1.9
SCML4Q8N228 DUX4L20-201ENST00000619712 1269 ntBASIC26.95■■□□□ 1.9
SCML4Q8N228 DUX4L21-201ENST00000622058 1269 ntBASIC26.95■■□□□ 1.9
SCML4Q8N228 DUX4L10-201ENST00000622460 1267 ntBASIC26.95■■□□□ 1.9
SCML4Q8N228 DUX4L25-201ENST00000624915 1269 ntBASIC26.95■■□□□ 1.9
SCML4Q8N228 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
SCML4Q8N228 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC26.95■■□□□ 1.9
SCML4Q8N228 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
SCML4Q8N228 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC26.94■■□□□ 1.9
SCML4Q8N228 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
SCML4Q8N228 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
SCML4Q8N228 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC26.92■■□□□ 1.9
SCML4Q8N228 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
SCML4Q8N228 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC26.92■■□□□ 1.9
SCML4Q8N228 RNF166-209ENST00000567844 633 ntTSL 5 BASIC26.92■■□□□ 1.9
SCML4Q8N228 CHML-204ENST00000638121 920 ntTSL 2 BASIC26.92■■□□□ 1.9
SCML4Q8N228 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
SCML4Q8N228 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC26.91■■□□□ 1.9
SCML4Q8N228 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
SCML4Q8N228 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC26.91■■□□□ 1.9
SCML4Q8N228 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC26.91■■□□□ 1.9
SCML4Q8N228 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC26.91■■□□□ 1.9
SCML4Q8N228 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
SCML4Q8N228 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC26.9■■□□□ 1.9
SCML4Q8N228 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC26.9■■□□□ 1.9
SCML4Q8N228 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC26.9■■□□□ 1.9
SCML4Q8N228 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC26.89■■□□□ 1.9
SCML4Q8N228 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
SCML4Q8N228 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC26.89■■□□□ 1.9
SCML4Q8N228 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC26.89■■□□□ 1.9
SCML4Q8N228 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
SCML4Q8N228 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
SCML4Q8N228 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
SCML4Q8N228 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC26.86■■□□□ 1.89
SCML4Q8N228 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
SCML4Q8N228 MIR3648-2-201ENST00000581792 180 ntBASIC26.86■■□□□ 1.89
SCML4Q8N228 MIR3648-1-201ENST00000615959 180 ntBASIC26.86■■□□□ 1.89
SCML4Q8N228 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
SCML4Q8N228 PVT1-219ENST00000523427 938 ntTSL 3 BASIC26.85■■□□□ 1.89
SCML4Q8N228 CR559946.2-201ENST00000623684 991 ntBASIC26.85■■□□□ 1.89
SCML4Q8N228 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC26.85■■□□□ 1.89
SCML4Q8N228 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC26.84■■□□□ 1.89
SCML4Q8N228 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC26.84■■□□□ 1.89
SCML4Q8N228 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC26.84■■□□□ 1.89
SCML4Q8N228 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC26.84■■□□□ 1.89
SCML4Q8N228 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
SCML4Q8N228 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC26.83■■□□□ 1.89
SCML4Q8N228 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
SCML4Q8N228 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC26.83■■□□□ 1.89
SCML4Q8N228 ABCB10P3-201ENST00000561950 2166 ntBASIC26.83■■□□□ 1.89
SCML4Q8N228 GDI1-215ENST00000630693 786 ntTSL 4 BASIC26.83■■□□□ 1.89
SCML4Q8N228 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC26.83■■□□□ 1.89
SCML4Q8N228 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
SCML4Q8N228 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
SCML4Q8N228 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC26.82■■□□□ 1.88
SCML4Q8N228 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
SCML4Q8N228 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
SCML4Q8N228 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
SCML4Q8N228 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC26.82■■□□□ 1.88
SCML4Q8N228 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC26.81■■□□□ 1.88
SCML4Q8N228 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC26.81■■□□□ 1.88
SCML4Q8N228 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC26.81■■□□□ 1.88
SCML4Q8N228 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC26.8■■□□□ 1.88
SCML4Q8N228 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC26.79■■□□□ 1.88
SCML4Q8N228 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
SCML4Q8N228 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
SCML4Q8N228 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC26.79■■□□□ 1.88
SCML4Q8N228 AC100797.4-201ENST00000631653 1827 ntBASIC26.79■■□□□ 1.88
SCML4Q8N228 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC26.78■■□□□ 1.88
SCML4Q8N228 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC26.78■■□□□ 1.88
SCML4Q8N228 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC26.77■■□□□ 1.88
SCML4Q8N228 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC26.77■■□□□ 1.88
SCML4Q8N228 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
SCML4Q8N228 HES6-205ENST00000409356 528 ntTSL 2 BASIC26.77■■□□□ 1.88
SCML4Q8N228 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC26.77■■□□□ 1.88
SCML4Q8N228 AC016575.1-201ENST00000607026 382 ntBASIC26.76■■□□□ 1.87
SCML4Q8N228 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
SCML4Q8N228 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC26.75■■□□□ 1.87
SCML4Q8N228 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
SCML4Q8N228 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
SCML4Q8N228 AC110285.7-201ENST00000624417 1536 ntBASIC26.75■■□□□ 1.87
SCML4Q8N228 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
SCML4Q8N228 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
SCML4Q8N228 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
SCML4Q8N228 PEX7-203ENST00000541292 945 ntTSL 5 BASIC26.73■■□□□ 1.87
SCML4Q8N228 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
SCML4Q8N228 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
SCML4Q8N228 MIR639-201ENST00000384974 98 ntBASIC26.72■■□□□ 1.87
SCML4Q8N228 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC26.71■■□□□ 1.87
SCML4Q8N228 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC26.71■■□□□ 1.87
SCML4Q8N228 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
SCML4Q8N228 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
SCML4Q8N228 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
SCML4Q8N228 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC26.7■■□□□ 1.86
SCML4Q8N228 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC26.7■■□□□ 1.86
SCML4Q8N228 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
SCML4Q8N228 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
SCML4Q8N228 CHST11-202ENST00000546689 756 ntTSL 2 BASIC26.69■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms