Protein–RNA interactions for Protein: Q01080

RPA49, DNA-directed RNA polymerase I subunit RPA49, yeastyeast

Predicted RBP Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPA49Q01080 RPS6BYBR181C 711 nt8.46□□□□□ -1.06
RPA49Q01080 THI73YLR004C 1572 nt8.46□□□□□ -1.06
RPA49Q01080 YER156CYER156C 1017 nt8.45□□□□□ -1.06
RPA49Q01080 BXI1YNL305C 894 nt8.45□□□□□ -1.06
RPA49Q01080 ESBP6YNL125C 2022 nt8.44□□□□□ -1.06
RPA49Q01080 UTR5YEL035C 501 nt8.44□□□□□ -1.06
RPA49Q01080 BUD20YLR074C 501 nt8.43□□□□□ -1.06
RPA49Q01080 Q0010Q0010 387 nt8.43□□□□□ -1.06
RPA49Q01080 PUP3YER094C 618 nt8.41□□□□□ -1.06
RPA49Q01080 PAU21YOR394W 495 nt8.41□□□□□ -1.06
RPA49Q01080 PAU22YPL282C 495 nt8.41□□□□□ -1.06
RPA49Q01080 SRM1YGL097W 1449 nt8.4□□□□□ -1.06
RPA49Q01080 ADA2YDR448W 1305 nt8.4□□□□□ -1.06
RPA49Q01080 MRP1YDR347W 966 nt8.4□□□□□ -1.06
RPA49Q01080 HRA1HRA1 564 nt8.4□□□□□ -1.06
RPA49Q01080 SHC1YER096W 1539 nt8.39□□□□□ -1.07
RPA49Q01080 EHT1YBR177C 1356 nt8.38□□□□□ -1.07
RPA49Q01080 YOR343CYOR343C 327 nt8.38□□□□□ -1.07
RPA49Q01080 YRF1-3YGR296W 5580 nt8.37□□□□□ -1.07
RPA49Q01080 YRF1-6YNL339C 5580 nt8.37□□□□□ -1.07
RPA49Q01080 YRF1-7YPL283C 5580 nt8.37□□□□□ -1.07
RPA49Q01080 GDH1YOR375C 1365 nt8.37□□□□□ -1.07
RPA49Q01080 tD(GUC)BtD(GUC)B 72 nt8.37□□□□□ -1.07
RPA49Q01080 tD(GUC)DtD(GUC)D 72 nt8.37□□□□□ -1.07
RPA49Q01080 tD(GUC)G1tD(GUC)G1 72 nt8.37□□□□□ -1.07
RPA49Q01080 tD(GUC)G2tD(GUC)G2 72 nt8.37□□□□□ -1.07
RPA49Q01080 tD(GUC)I1tD(GUC)I1 72 nt8.37□□□□□ -1.07
RPA49Q01080 tD(GUC)I2tD(GUC)I2 72 nt8.37□□□□□ -1.07
RPA49Q01080 tD(GUC)J1tD(GUC)J1 72 nt8.37□□□□□ -1.07
RPA49Q01080 tD(GUC)J2tD(GUC)J2 72 nt8.37□□□□□ -1.07
RPA49Q01080 tD(GUC)J3tD(GUC)J3 72 nt8.37□□□□□ -1.07
RPA49Q01080 tD(GUC)J4tD(GUC)J4 72 nt8.37□□□□□ -1.07
RPA49Q01080 tD(GUC)KtD(GUC)K 72 nt8.37□□□□□ -1.07
RPA49Q01080 tD(GUC)L1tD(GUC)L1 72 nt8.37□□□□□ -1.07
RPA49Q01080 tD(GUC)L2tD(GUC)L2 72 nt8.37□□□□□ -1.07
RPA49Q01080 tD(GUC)MtD(GUC)M 72 nt8.37□□□□□ -1.07
RPA49Q01080 tD(GUC)OtD(GUC)O 72 nt8.37□□□□□ -1.07
RPA49Q01080 ATP2YJR121W 1536 nt8.37□□□□□ -1.07
RPA49Q01080 LRO1YNR008W 1986 nt8.37□□□□□ -1.07
RPA49Q01080 ABP1YCR088W 1779 nt8.36□□□□□ -1.07
RPA49Q01080 YHL030W-AYHL030W-A 462 nt8.36□□□□□ -1.07
RPA49Q01080 LEA1YPL213W 717 nt8.36□□□□□ -1.07
RPA49Q01080 INO1YJL153C 1602 nt8.36□□□□□ -1.07
RPA49Q01080 TAD2YJL035C 753 nt8.35□□□□□ -1.07
RPA49Q01080 HIS3YOR202W 663 nt8.35□□□□□ -1.07
RPA49Q01080 NDE2YDL085W 1638 nt8.35□□□□□ -1.07
RPA49Q01080 TDH1YJL052W 999 nt8.34□□□□□ -1.07
RPA49Q01080 RCF1YML030W 480 nt8.34□□□□□ -1.07
RPA49Q01080 PRE10YOR362C 867 nt8.34□□□□□ -1.07
RPA49Q01080 ILV2YMR108W 2064 nt8.34□□□□□ -1.07
RPA49Q01080 ELP4YPL101W 1371 nt8.34□□□□□ -1.07
RPA49Q01080 HMG2YLR450W 3138 nt8.32□□□□□ -1.08
RPA49Q01080 HXT8YJL214W 1710 nt8.32□□□□□ -1.08
RPA49Q01080 TIM50YPL063W 1431 nt8.32□□□□□ -1.08
RPA49Q01080 BUD31YCR063W 474 nt8.32□□□□□ -1.08
RPA49Q01080 YIL168WYIL168W 384 nt8.32□□□□□ -1.08
RPA49Q01080 PMU1YKL128C 888 nt8.32□□□□□ -1.08
RPA49Q01080 JHD1YER051W 1479 nt8.32□□□□□ -1.08
RPA49Q01080 YGR137WYGR137W 375 nt8.31□□□□□ -1.08
RPA49Q01080 DTR1YBR180W 1719 nt8.31□□□□□ -1.08
RPA49Q01080 YAL016C-AYAL016C-A 315 nt8.3□□□□□ -1.08
RPA49Q01080 MIM1YOL026C 342 nt8.3□□□□□ -1.08
RPA49Q01080 DIP5YPL265W 1827 nt8.3□□□□□ -1.08
RPA49Q01080 HBS1YKR084C 1836 nt8.29□□□□□ -1.08
RPA49Q01080 FTH1YBR207W 1398 nt8.29□□□□□ -1.08
RPA49Q01080 WSC3YOL105C 1671 nt8.29□□□□□ -1.08
RPA49Q01080 tL(UAA)B1tL(UAA)B1 84 nt8.28□□□□□ -1.08
RPA49Q01080 tL(UAA)B2tL(UAA)B2 84 nt8.28□□□□□ -1.08
RPA49Q01080 tL(UAA)DtL(UAA)D 84 nt8.28□□□□□ -1.08
RPA49Q01080 SUP51tL(UAA)J 84 nt8.28□□□□□ -1.08
RPA49Q01080 tL(UAA)KtL(UAA)K 84 nt8.28□□□□□ -1.08
RPA49Q01080 tL(UAA)LtL(UAA)L 84 nt8.28□□□□□ -1.08
RPA49Q01080 tL(UAA)NtL(UAA)N 84 nt8.28□□□□□ -1.08
RPA49Q01080 TDA4YJR116W 840 nt8.28□□□□□ -1.08
RPA49Q01080 RFC1YOR217W 2586 nt8.28□□□□□ -1.08
RPA49Q01080 HEM14YER014W 1620 nt8.28□□□□□ -1.08
RPA49Q01080 YIL177CYIL177C 5277 nt8.28□□□□□ -1.08
RPA49Q01080 ORT1YOR130C 879 nt8.27□□□□□ -1.09
RPA49Q01080 RSC4YKR008W 1878 nt8.26□□□□□ -1.09
RPA49Q01080 TGL5YOR081C 2250 nt8.26□□□□□ -1.09
RPA49Q01080 NME1NME1 340 nt8.26□□□□□ -1.09
RPA49Q01080 TOS1YBR162C 1368 nt8.25□□□□□ -1.09
RPA49Q01080 RPL12BYDR418W 498 nt8.25□□□□□ -1.09
RPA49Q01080 ADE1YAR015W 921 nt8.25□□□□□ -1.09
RPA49Q01080 YNL140CYNL140C 570 nt8.25□□□□□ -1.09
RPA49Q01080 YOR072WYOR072W 315 nt8.25□□□□□ -1.09
RPA49Q01080 DUR3YHL016C 2208 nt8.25□□□□□ -1.09
RPA49Q01080 GLY1YEL046C 1164 nt8.24□□□□□ -1.09
RPA49Q01080 INM1YHR046C 888 nt8.24□□□□□ -1.09
RPA49Q01080 YJR154WYJR154W 1041 nt8.24□□□□□ -1.09
RPA49Q01080 TIF3YPR163C 1311 nt8.24□□□□□ -1.09
RPA49Q01080 MRN1YPL184C 1839 nt8.23□□□□□ -1.09
RPA49Q01080 ALD5YER073W 1563 nt8.22□□□□□ -1.09
RPA49Q01080 YDR306CYDR306C 1437 nt8.22□□□□□ -1.09
RPA49Q01080 NUP53YMR153W 1428 nt8.22□□□□□ -1.09
RPA49Q01080 ARO3YDR035W 1113 nt8.22□□□□□ -1.09
RPA49Q01080 YJL043WYJL043W 774 nt8.22□□□□□ -1.09
RPA49Q01080 MRP7YNL005C 1116 nt8.22□□□□□ -1.09
RPA49Q01080 ARG7YMR062C 1326 nt8.22□□□□□ -1.09
RPA49Q01080 WSC4YHL028W 1818 nt8.2□□□□□ -1.1
Retrieved 100 of 7,029 protein–RNA pairs in 10.6 ms