Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 AL135925.1-201ENST00000605920 1701 ntBASIC26.39■■□□□ 1.82
IRX4P78413 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.82
IRX4P78413 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC26.39■■□□□ 1.82
IRX4P78413 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC26.39■■□□□ 1.82
IRX4P78413 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC26.39■■□□□ 1.82
IRX4P78413 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC26.38■■□□□ 1.81
IRX4P78413 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
IRX4P78413 METRNL-202ENST00000570778 967 ntTSL 5 BASIC26.37■■□□□ 1.81
IRX4P78413 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC26.37■■□□□ 1.81
IRX4P78413 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC26.37■■□□□ 1.81
IRX4P78413 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC26.37■■□□□ 1.81
IRX4P78413 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
IRX4P78413 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
IRX4P78413 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC26.35■■□□□ 1.81
IRX4P78413 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC26.35■■□□□ 1.81
IRX4P78413 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
IRX4P78413 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
IRX4P78413 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
IRX4P78413 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
IRX4P78413 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
IRX4P78413 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
IRX4P78413 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC26.33■■□□□ 1.81
IRX4P78413 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
IRX4P78413 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
IRX4P78413 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
IRX4P78413 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
IRX4P78413 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
IRX4P78413 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
IRX4P78413 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
IRX4P78413 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
IRX4P78413 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
IRX4P78413 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC26.31■■□□□ 1.8
IRX4P78413 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
IRX4P78413 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC26.3■■□□□ 1.8
IRX4P78413 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
IRX4P78413 DUX4L13-201ENST00000554103 1267 ntBASIC26.3■■□□□ 1.8
IRX4P78413 DUX4L15-201ENST00000611059 1267 ntBASIC26.3■■□□□ 1.8
IRX4P78413 DUX4L23-201ENST00000615195 1269 ntBASIC26.3■■□□□ 1.8
IRX4P78413 DUX4L24-201ENST00000617576 1269 ntBASIC26.3■■□□□ 1.8
IRX4P78413 DUX4L22-201ENST00000618238 1269 ntBASIC26.3■■□□□ 1.8
IRX4P78413 DUX4L20-201ENST00000619712 1269 ntBASIC26.3■■□□□ 1.8
IRX4P78413 DUX4L21-201ENST00000622058 1269 ntBASIC26.3■■□□□ 1.8
IRX4P78413 DUX4L10-201ENST00000622460 1267 ntBASIC26.3■■□□□ 1.8
IRX4P78413 DUX4L25-201ENST00000624915 1269 ntBASIC26.3■■□□□ 1.8
IRX4P78413 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
IRX4P78413 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
IRX4P78413 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
IRX4P78413 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
IRX4P78413 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC26.29■■□□□ 1.8
IRX4P78413 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
IRX4P78413 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
IRX4P78413 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
IRX4P78413 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
IRX4P78413 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
IRX4P78413 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC26.27■■□□□ 1.8
IRX4P78413 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
IRX4P78413 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC26.27■■□□□ 1.8
IRX4P78413 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
IRX4P78413 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
IRX4P78413 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC26.26■■□□□ 1.79
IRX4P78413 HES6-205ENST00000409356 528 ntTSL 2 BASIC26.26■■□□□ 1.79
IRX4P78413 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
IRX4P78413 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC26.25■■□□□ 1.79
IRX4P78413 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
IRX4P78413 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
IRX4P78413 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
IRX4P78413 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
IRX4P78413 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
IRX4P78413 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
IRX4P78413 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
IRX4P78413 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC26.23■■□□□ 1.79
IRX4P78413 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
IRX4P78413 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC26.22■■□□□ 1.79
IRX4P78413 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
IRX4P78413 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC26.22■■□□□ 1.79
IRX4P78413 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
IRX4P78413 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
IRX4P78413 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC26.21■■□□□ 1.79
IRX4P78413 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC26.21■■□□□ 1.79
IRX4P78413 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
IRX4P78413 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
IRX4P78413 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.78
IRX4P78413 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
IRX4P78413 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
IRX4P78413 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC26.19■■□□□ 1.78
IRX4P78413 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC26.19■■□□□ 1.78
IRX4P78413 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC26.19■■□□□ 1.78
IRX4P78413 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC26.19■■□□□ 1.78
IRX4P78413 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC26.19■■□□□ 1.78
IRX4P78413 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC26.18■■□□□ 1.78
IRX4P78413 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC26.18■■□□□ 1.78
IRX4P78413 CHML-204ENST00000638121 920 ntTSL 2 BASIC26.18■■□□□ 1.78
IRX4P78413 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC26.17■■□□□ 1.78
IRX4P78413 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC26.17■■□□□ 1.78
IRX4P78413 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC26.17■■□□□ 1.78
IRX4P78413 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
IRX4P78413 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC26.16■■□□□ 1.78
IRX4P78413 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
IRX4P78413 RARRES2P2-201ENST00000394842 485 ntBASIC26.15■■□□□ 1.78
IRX4P78413 SRP68-213ENST00000629930 165 ntTSL 5 BASIC26.15■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms