Protein–RNA interactions for Protein: P40505

SDS3, Transcriptional regulatory protein SDS3, yeastyeast

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SDS3P40505 tD(GUC)J4tD(GUC)J4 72 nt8.66□□□□□ -1.02
SDS3P40505 tD(GUC)KtD(GUC)K 72 nt8.66□□□□□ -1.02
SDS3P40505 tD(GUC)L1tD(GUC)L1 72 nt8.66□□□□□ -1.02
SDS3P40505 tD(GUC)L2tD(GUC)L2 72 nt8.66□□□□□ -1.02
SDS3P40505 tD(GUC)MtD(GUC)M 72 nt8.66□□□□□ -1.02
SDS3P40505 tD(GUC)OtD(GUC)O 72 nt8.66□□□□□ -1.02
SDS3P40505 YIR035CYIR035C 765 nt8.66□□□□□ -1.02
SDS3P40505 BUB2YMR055C 921 nt8.66□□□□□ -1.02
SDS3P40505 HXT11YOL156W 1704 nt8.66□□□□□ -1.02
SDS3P40505 CHS7YHR142W 951 nt8.64□□□□□ -1.03
SDS3P40505 YOR072WYOR072W 315 nt8.64□□□□□ -1.03
SDS3P40505 OLA1YBR025C 1185 nt8.64□□□□□ -1.03
SDS3P40505 SAM50YNL026W 1455 nt8.64□□□□□ -1.03
SDS3P40505 DUR3YHL016C 2208 nt8.62□□□□□ -1.03
SDS3P40505 YBR056WYBR056W 1506 nt8.62□□□□□ -1.03
SDS3P40505 SRM1YGL097W 1449 nt8.62□□□□□ -1.03
SDS3P40505 CSM2YIL132C 642 nt8.61□□□□□ -1.03
SDS3P40505 MIM1YOL026C 342 nt8.61□□□□□ -1.03
SDS3P40505 MET22YOL064C 1074 nt8.61□□□□□ -1.03
SDS3P40505 LSP1YPL004C 1026 nt8.61□□□□□ -1.03
SDS3P40505 LPD1YFL018C 1500 nt8.6□□□□□ -1.03
SDS3P40505 ADE2YOR128C 1716 nt8.6□□□□□ -1.03
SDS3P40505 SNU66YOR308C 1764 nt8.59□□□□□ -1.03
SDS3P40505 YRF1-2YER190W 5046 nt8.58□□□□□ -1.04
SDS3P40505 YMR166CYMR166C 1107 nt8.58□□□□□ -1.04
SDS3P40505 YPL108WYPL108W 507 nt8.58□□□□□ -1.04
SDS3P40505 MAS1YLR163C 1389 nt8.58□□□□□ -1.04
SDS3P40505 YMR210WYMR210W 1350 nt8.57□□□□□ -1.04
SDS3P40505 YLR072WYLR072W 2082 nt8.57□□□□□ -1.04
SDS3P40505 OCH1YGL038C 1443 nt8.56□□□□□ -1.04
SDS3P40505 INO1YJL153C 1602 nt8.56□□□□□ -1.04
SDS3P40505 RPL12BYDR418W 498 nt8.56□□□□□ -1.04
SDS3P40505 CAK1YFL029C 1107 nt8.56□□□□□ -1.04
SDS3P40505 RNA170RNA170 169 nt8.56□□□□□ -1.04
SDS3P40505 LEA1YPL213W 717 nt8.56□□□□□ -1.04
SDS3P40505 HIS3YOR202W 663 nt8.55□□□□□ -1.04
SDS3P40505 RHO1YPR165W 630 nt8.55□□□□□ -1.04
SDS3P40505 GNP1YDR508C 1992 nt8.54□□□□□ -1.04
SDS3P40505 FTH1YBR207W 1398 nt8.54□□□□□ -1.04
SDS3P40505 ECM10YEL030W 1935 nt8.54□□□□□ -1.04
SDS3P40505 ABP1YCR088W 1779 nt8.53□□□□□ -1.04
SDS3P40505 PDC6YGR087C 1692 nt8.53□□□□□ -1.04
SDS3P40505 SWM1YDR260C 513 nt8.53□□□□□ -1.04
SDS3P40505 ORT1YOR130C 879 nt8.53□□□□□ -1.04
SDS3P40505 THI73YLR004C 1572 nt8.52□□□□□ -1.04
SDS3P40505 MEX67YPL169C 1800 nt8.52□□□□□ -1.05
SDS3P40505 YOR343CYOR343C 327 nt8.51□□□□□ -1.05
SDS3P40505 MAM3YOL060C 2121 nt8.51□□□□□ -1.05
SDS3P40505 NDE2YDL085W 1638 nt8.51□□□□□ -1.05
SDS3P40505 HBS1YKR084C 1836 nt8.5□□□□□ -1.05
SDS3P40505 YMR007WYMR007W 381 nt8.5□□□□□ -1.05
SDS3P40505 YPT31YER031C 672 nt8.49□□□□□ -1.05
SDS3P40505 snR4snR4 186 nt8.49□□□□□ -1.05
SDS3P40505 TOS1YBR162C 1368 nt8.48□□□□□ -1.05
SDS3P40505 PET18YCR020C 648 nt8.48□□□□□ -1.05
SDS3P40505 BUD31YCR063W 474 nt8.48□□□□□ -1.05
SDS3P40505 UFD1YGR048W 1086 nt8.48□□□□□ -1.05
SDS3P40505 RRT14YIL127C 621 nt8.48□□□□□ -1.05
SDS3P40505 LRO1YNR008W 1986 nt8.48□□□□□ -1.05
SDS3P40505 MFG1YDL233W 1377 nt8.48□□□□□ -1.05
SDS3P40505 EHT1YBR177C 1356 nt8.48□□□□□ -1.05
SDS3P40505 YOR268CYOR268C 399 nt8.47□□□□□ -1.05
SDS3P40505 SHC1YER096W 1539 nt8.47□□□□□ -1.05
SDS3P40505 RCR1YBR005W 642 nt8.46□□□□□ -1.06
SDS3P40505 PUP3YER094C 618 nt8.45□□□□□ -1.06
SDS3P40505 YAL016C-AYAL016C-A 315 nt8.45□□□□□ -1.06
SDS3P40505 YJL160CYJL160C 864 nt8.45□□□□□ -1.06
SDS3P40505 YHL030W-AYHL030W-A 462 nt8.44□□□□□ -1.06
SDS3P40505 RCF1YML030W 480 nt8.44□□□□□ -1.06
SDS3P40505 YNL140CYNL140C 570 nt8.44□□□□□ -1.06
SDS3P40505 RPS6AYPL090C 711 nt8.44□□□□□ -1.06
SDS3P40505 RPS6BYBR181C 711 nt8.44□□□□□ -1.06
SDS3P40505 ADE5,7YGL234W 2409 nt8.43□□□□□ -1.06
SDS3P40505 YMR206WYMR206W 942 nt8.43□□□□□ -1.06
SDS3P40505 PAU21YOR394W 495 nt8.43□□□□□ -1.06
SDS3P40505 PAU22YPL282C 495 nt8.43□□□□□ -1.06
SDS3P40505 TGL5YOR081C 2250 nt8.42□□□□□ -1.06
SDS3P40505 YPR084WYPR084W 1371 nt8.41□□□□□ -1.06
SDS3P40505 TIF3YPR163C 1311 nt8.41□□□□□ -1.06
SDS3P40505 YGR137WYGR137W 375 nt8.41□□□□□ -1.06
SDS3P40505 BXI1YNL305C 894 nt8.41□□□□□ -1.06
SDS3P40505 INM1YHR046C 888 nt8.4□□□□□ -1.06
SDS3P40505 TDA4YJR116W 840 nt8.4□□□□□ -1.06
SDS3P40505 MRP7YNL005C 1116 nt8.4□□□□□ -1.06
SDS3P40505 MRN1YPL184C 1839 nt8.4□□□□□ -1.07
SDS3P40505 DIP5YPL265W 1827 nt8.4□□□□□ -1.07
SDS3P40505 HXT8YJL214W 1710 nt8.4□□□□□ -1.07
SDS3P40505 GLY1YEL046C 1164 nt8.39□□□□□ -1.07
SDS3P40505 WSC3YOL105C 1671 nt8.38□□□□□ -1.07
SDS3P40505 ARO3YDR035W 1113 nt8.37□□□□□ -1.07
SDS3P40505 UTR5YEL035C 501 nt8.37□□□□□ -1.07
SDS3P40505 MFT1YML062C 1179 nt8.37□□□□□ -1.07
SDS3P40505 HRA1HRA1 564 nt8.36□□□□□ -1.07
SDS3P40505 ALG7YBR243C 1347 nt8.35□□□□□ -1.07
SDS3P40505 PRE10YOR362C 867 nt8.35□□□□□ -1.07
SDS3P40505 HOG1YLR113W 1308 nt8.34□□□□□ -1.07
SDS3P40505 SNP1YIL061C 903 nt8.34□□□□□ -1.07
SDS3P40505 YER156CYER156C 1017 nt8.33□□□□□ -1.08
SDS3P40505 YEL023CYEL023C 2049 nt8.32□□□□□ -1.08
SDS3P40505 DIA4YHR011W 1341 nt8.32□□□□□ -1.08
Retrieved 100 of 7,029 protein–RNA pairs in 13.6 ms