Protein–RNA interactions for Protein: P38956

SNF11, Transcription regulatory protein SNF11, yeastyeast

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SNF11P38956 tA(AGC)K2tA(AGC)K2 73 nt6.37□□□□□ -1.39
SNF11P38956 tA(AGC)LtA(AGC)L 73 nt6.37□□□□□ -1.39
SNF11P38956 tA(AGC)M1tA(AGC)M1 73 nt6.37□□□□□ -1.39
SNF11P38956 tA(AGC)M2tA(AGC)M2 73 nt6.37□□□□□ -1.39
SNF11P38956 tA(AGC)PtA(AGC)P 73 nt6.37□□□□□ -1.39
SNF11P38956 FLX1YIL134W 936 nt6.37□□□□□ -1.39
SNF11P38956 CYC3YAL039C 810 nt6.37□□□□□ -1.39
SNF11P38956 IPL1YPL209C 1104 nt6.37□□□□□ -1.39
SNF11P38956 PRC1YMR297W 1599 nt6.36□□□□□ -1.39
SNF11P38956 YFR020WYFR020W 699 nt6.36□□□□□ -1.39
SNF11P38956 YMR210WYMR210W 1350 nt6.35□□□□□ -1.39
SNF11P38956 GGC1YDL198C 903 nt6.35□□□□□ -1.39
SNF11P38956 SEN2YLR105C 1134 nt6.35□□□□□ -1.39
SNF11P38956 YLR460CYLR460C 1131 nt6.35□□□□□ -1.39
SNF11P38956 YLR072WYLR072W 2082 nt6.35□□□□□ -1.39
SNF11P38956 ADE5,7YGL234W 2409 nt6.35□□□□□ -1.39
SNF11P38956 YLR173WYLR173W 1827 nt6.34□□□□□ -1.39
SNF11P38956 YJL009WYJL009W 327 nt6.34□□□□□ -1.39
SNF11P38956 SRP102YKL154W 735 nt6.34□□□□□ -1.39
SNF11P38956 NAP1YKR048C 1254 nt6.34□□□□□ -1.39
SNF11P38956 PMT7YDR307W 1989 nt6.34□□□□□ -1.39
SNF11P38956 YCR025CYCR025C 411 nt6.33□□□□□ -1.4
SNF11P38956 BUB2YMR055C 921 nt6.33□□□□□ -1.4
SNF11P38956 snR86snR86 1004 nt6.32□□□□□ -1.4
SNF11P38956 CTF3YLR381W 2202 nt6.31□□□□□ -1.4
SNF11P38956 CHS7YHR142W 951 nt6.31□□□□□ -1.4
SNF11P38956 YJR149WYJR149W 1215 nt6.31□□□□□ -1.4
SNF11P38956 YLR280CYLR280C 351 nt6.31□□□□□ -1.4
SNF11P38956 YJL064WYJL064W 396 nt6.3□□□□□ -1.4
SNF11P38956 ATP10YLR393W 840 nt6.3□□□□□ -1.4
SNF11P38956 OLA1YBR025C 1185 nt6.3□□□□□ -1.4
SNF11P38956 NDE1YMR145C 1683 nt6.3□□□□□ -1.4
SNF11P38956 ECM10YEL030W 1935 nt6.29□□□□□ -1.4
SNF11P38956 AFG2YLR397C 2343 nt6.29□□□□□ -1.4
SNF11P38956 PAU19YMR325W 375 nt6.29□□□□□ -1.4
SNF11P38956 BEM1YBR200W 1656 nt6.29□□□□□ -1.4
SNF11P38956 MAS1YLR163C 1389 nt6.29□□□□□ -1.4
SNF11P38956 SPE4YLR146C 903 nt6.28□□□□□ -1.4
SNF11P38956 YBR056WYBR056W 1506 nt6.27□□□□□ -1.41
SNF11P38956 ERO1YML130C 1692 nt6.26□□□□□ -1.41
SNF11P38956 HTS1YPR033C 1641 nt6.26□□□□□ -1.41
SNF11P38956 SER2YGR208W 930 nt6.26□□□□□ -1.41
SNF11P38956 ERG6YML008C 1152 nt6.26□□□□□ -1.41
SNF11P38956 LEA1YPL213W 717 nt6.26□□□□□ -1.41
SNF11P38956 GCD11YER025W 1584 nt6.26□□□□□ -1.41
SNF11P38956 YMR253CYMR253C 1245 nt6.25□□□□□ -1.41
SNF11P38956 YPL264CYPL264C 1062 nt6.25□□□□□ -1.41
SNF11P38956 GNP1YDR508C 1992 nt6.25□□□□□ -1.41
SNF11P38956 HIS3YOR202W 663 nt6.24□□□□□ -1.41
SNF11P38956 ERR3YMR323W 1314 nt6.24□□□□□ -1.41
SNF11P38956 ERR1YOR393W 1314 nt6.24□□□□□ -1.41
SNF11P38956 ERR2YPL281C 1314 nt6.24□□□□□ -1.41
SNF11P38956 MET22YOL064C 1074 nt6.23□□□□□ -1.41
SNF11P38956 NDE2YDL085W 1638 nt6.23□□□□□ -1.41
SNF11P38956 YIL108WYIL108W 2091 nt6.22□□□□□ -1.41
SNF11P38956 YMR166CYMR166C 1107 nt6.22□□□□□ -1.41
SNF11P38956 ATO2YNR002C 849 nt6.22□□□□□ -1.41
SNF11P38956 ABP1YCR088W 1779 nt6.21□□□□□ -1.41
SNF11P38956 YGR210CYGR210C 1236 nt6.21□□□□□ -1.42
SNF11P38956 HXT9YJL219W 1704 nt6.2□□□□□ -1.42
SNF11P38956 OCH1YGL038C 1443 nt6.2□□□□□ -1.42
SNF11P38956 YGR137WYGR137W 375 nt6.2□□□□□ -1.42
SNF11P38956 MEP1YGR121C 1479 nt6.2□□□□□ -1.42
SNF11P38956 BUD31YCR063W 474 nt6.19□□□□□ -1.42
SNF11P38956 RRT14YIL127C 621 nt6.19□□□□□ -1.42
SNF11P38956 RNA170RNA170 169 nt6.19□□□□□ -1.42
SNF11P38956 YNL140CYNL140C 570 nt6.19□□□□□ -1.42
SNF11P38956 PDC6YGR087C 1692 nt6.19□□□□□ -1.42
SNF11P38956 YER152CYER152C 1332 nt6.19□□□□□ -1.42
SNF11P38956 TIF3YPR163C 1311 nt6.19□□□□□ -1.42
SNF11P38956 YCP4YCR004C 744 nt6.18□□□□□ -1.42
SNF11P38956 YEL034C-AYEL034C-A 603 nt6.18□□□□□ -1.42
SNF11P38956 CAK1YFL029C 1107 nt6.18□□□□□ -1.42
SNF11P38956 TDA4YJR116W 840 nt6.18□□□□□ -1.42
SNF11P38956 RCF1YML030W 480 nt6.18□□□□□ -1.42
SNF11P38956 YPL108WYPL108W 507 nt6.18□□□□□ -1.42
SNF11P38956 ADE2YOR128C 1716 nt6.18□□□□□ -1.42
SNF11P38956 AQR1YNL065W 1761 nt6.18□□□□□ -1.42
SNF11P38956 INM1YHR046C 888 nt6.17□□□□□ -1.42
SNF11P38956 INO1YJL153C 1602 nt6.17□□□□□ -1.42
SNF11P38956 EHT1YBR177C 1356 nt6.17□□□□□ -1.42
SNF11P38956 CCR4YAL021C 2514 nt6.17□□□□□ -1.42
SNF11P38956 TGL5YOR081C 2250 nt6.16□□□□□ -1.42
SNF11P38956 MAS2YHR024C 1449 nt6.16□□□□□ -1.42
SNF11P38956 GLY1YEL046C 1164 nt6.16□□□□□ -1.42
SNF11P38956 YPT31YER031C 672 nt6.16□□□□□ -1.42
SNF11P38956 PUP1YOR157C 786 nt6.16□□□□□ -1.42
SNF11P38956 LSP1YPL004C 1026 nt6.16□□□□□ -1.42
SNF11P38956 RHO1YPR165W 630 nt6.16□□□□□ -1.42
SNF11P38956 SAM50YNL026W 1455 nt6.15□□□□□ -1.42
SNF11P38956 WSC3YOL105C 1671 nt6.15□□□□□ -1.42
SNF11P38956 WSC4YHL028W 1818 nt6.15□□□□□ -1.43
SNF11P38956 TGA1tA(UGC)A 73 nt6.14□□□□□ -1.43
SNF11P38956 tA(UGC)EtA(UGC)E 73 nt6.14□□□□□ -1.43
SNF11P38956 tA(UGC)GtA(UGC)G 73 nt6.14□□□□□ -1.43
SNF11P38956 tA(UGC)LtA(UGC)L 73 nt6.14□□□□□ -1.43
SNF11P38956 tA(UGC)OtA(UGC)O 73 nt6.14□□□□□ -1.43
SNF11P38956 YDR510C-AYDR510C-A 117 nt6.14□□□□□ -1.43
SNF11P38956 PUP3YER094C 618 nt6.14□□□□□ -1.43
SNF11P38956 YMR007WYMR007W 381 nt6.14□□□□□ -1.43
Retrieved 100 of 7,029 protein–RNA pairs in 42 ms