Protein–RNA interactions for Protein: P23246

SFPQ, Splicing factor, proline- and glutamine-rich, humanhuman

Known RBP eCLIP

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQP23246 YWHAZ-215ENST00000518736 883 ntTSL 320.04■□□□□ 0.81e-6■■■■□ 23.2
SFPQP23246 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.571e-6■■■■□ 23.2
SFPQP23246 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.081e-6■■■■□ 23.2
SFPQP23246 YWHAZ-207ENST00000395958 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.361e-6■■■■□ 23.2
SFPQP23246 YWHAZ-212ENST00000480304 2247 ntTSL 212.76□□□□□ -0.371e-6■■■■□ 23.2
SFPQP23246 YWHAZ-216ENST00000521309 1399 ntTSL 2 BASIC12.06□□□□□ -0.481e-6■■■■□ 23.2
SFPQP23246 YWHAZ-217ENST00000521328 511 ntTSL 511.55□□□□□ -0.561e-6■■■■□ 23.2
SFPQP23246 YWHAZ-202ENST00000395948 812 ntTSL 3 BASIC10.47□□□□□ -0.731e-6■■■■□ 23.2
SFPQP23246 AMD1-202ENST00000368877 1605 ntTSL 2 BASIC10.22□□□□□ -0.779e-10■■■■□ 23.2
SFPQP23246 AMD1-201ENST00000368876 3040 ntTSL 5 BASIC9.64□□□□□ -0.879e-10■■■■□ 23.2
SFPQP23246 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC7.75□□□□□ -1.179e-10■■■■□ 23.2
SFPQP23246 AMD1-205ENST00000451850 3121 ntTSL 1 (best)7.19□□□□□ -1.269e-10■■■■□ 23.2
SFPQP23246 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.419e-10■■■■□ 23.2
SFPQP23246 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.751e-6■■■■□ 23.2
SFPQP23246 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.841e-6■■■■□ 23.2
SFPQP23246 CCDC144NL-AS1-205ENST00000439794 481 ntTSL 316.21■□□□□ 0.195e-9■■■■□ 23.1
SFPQP23246 MAD1L1-217ENST00000469871 477 ntTSL 38.09□□□□□ -1.118e-9■■■■□ 23
SFPQP23246 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC36.02■■■■□ 3.363e-6■■■■□ 23
SFPQP23246 PPP2R2D-207ENST00000616467 2058 ntTSL 1 (best)27.7■■■□□ 2.023e-6■■■■□ 23
SFPQP23246 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC27.59■■■□□ 2.013e-6■■■■□ 23
SFPQP23246 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.81e-9■■■■□ 23
SFPQP23246 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.773e-6■■■■□ 23
SFPQP23246 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC26.1■■□□□ 1.773e-6■■■■□ 23
SFPQP23246 GATA4-203ENST00000526716 686 ntTSL 425.24■■□□□ 1.633e-6■■■■□ 23
SFPQP23246 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.423e-6■■■■□ 23
SFPQP23246 TESC-206ENST00000541210 936 ntTSL 3 BASIC23.68■■□□□ 1.383e-6■■■■□ 23
SFPQP23246 TESC-202ENST00000462502 854 ntTSL 523.6■■□□□ 1.373e-6■■■■□ 23
SFPQP23246 TESC-208ENST00000552139 307 ntTSL 223.51■■□□□ 1.353e-6■■■■□ 23
SFPQP23246 BAIAP2-227ENST00000576470 593 ntTSL 222.61■■□□□ 1.213e-6■■■■□ 23
SFPQP23246 TESC-203ENST00000470612 1057 ntTSL 222.38■■□□□ 1.173e-6■■■■□ 23
SFPQP23246 TESC-204ENST00000482176 841 ntTSL 322.12■■□□□ 1.133e-6■■■■□ 23
SFPQP23246 BAIAP2-224ENST00000575989 565 ntTSL 421.57■■□□□ 1.043e-6■■■■□ 23
SFPQP23246 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.043e-6■■■■□ 23
SFPQP23246 PPP2R2D-204ENST00000482010 1792 ntTSL 220.3■□□□□ 0.843e-6■■■■□ 23
SFPQP23246 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.733e-6■■■■□ 23
SFPQP23246 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.641e-9■■■■□ 23
SFPQP23246 PPP2R2D-205ENST00000490777 1462 ntTSL 1 (best)18.72■□□□□ 0.593e-6■■■■□ 23
SFPQP23246 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC18.6■□□□□ 0.573e-6■■■■□ 23
SFPQP23246 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.523e-6■■■■□ 23
SFPQP23246 BAIAP2-208ENST00000572073 782 ntTSL 318.11■□□□□ 0.493e-6■■■■□ 23
SFPQP23246 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC18.06■□□□□ 0.483e-6■■■■□ 23
SFPQP23246 BAIAP2-209ENST00000572329 2133 ntTSL 217.55■□□□□ 0.43e-6■■■■□ 23
SFPQP23246 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.323e-6■■■■□ 23
SFPQP23246 BAIAP2-206ENST00000570913 559 ntTSL 417■□□□□ 0.313e-6■■■■□ 23
SFPQP23246 BAIAP2-221ENST00000575750 584 ntTSL 416.7■□□□□ 0.263e-6■■■■□ 23
SFPQP23246 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.253e-6■■■■□ 23
SFPQP23246 BAIAP2-207ENST00000571530 581 ntTSL 415.24■□□□□ 0.033e-6■■■■□ 23
SFPQP23246 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.013e-6■■■■□ 23
SFPQP23246 BAIAP2-214ENST00000573677 646 ntTSL 415□□□□□ -0.013e-6■■■■□ 23
SFPQP23246 BAIAP2-218ENST00000574804 631 ntTSL 314.73□□□□□ -0.053e-6■■■■□ 23
SFPQP23246 BAIAP2-215ENST00000573894 657 ntTSL 313.94□□□□□ -0.183e-6■■■■□ 23
SFPQP23246 BAIAP2-223ENST00000575958 567 ntTSL 412.97□□□□□ -0.333e-6■■■■□ 23
SFPQP23246 BAIAP2-226ENST00000576364 542 ntTSL 512.71□□□□□ -0.373e-6■■■■□ 23
SFPQP23246 PPP2R2D-202ENST00000470416 6203 ntTSL 1 (best)12.4□□□□□ -0.423e-6■■■■□ 23
SFPQP23246 BAIAP2-213ENST00000573659 578 ntTSL 410.78□□□□□ -0.683e-6■■■■□ 23
SFPQP23246 BAIAP2-212ENST00000573017 574 ntTSL 410.31□□□□□ -0.763e-6■■■■□ 23
SFPQP23246 BAIAP2-211ENST00000572918 626 ntTSL 47.44□□□□□ -1.223e-6■■■■□ 23
SFPQP23246 MAD1L1-205ENST00000421113 564 ntTSL 421.87■■□□□ 1.092e-6■■■■□ 22.9
SFPQP23246 MAD1L1-210ENST00000444373 535 ntTSL 417.2■□□□□ 0.342e-6■■■■□ 22.9
SFPQP23246 DAZAP1-207ENST00000589484 3414 ntTSL 214.65□□□□□ -0.061e-6■■■■□ 22.7
SFPQP23246 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.442e-7■■■■□ 22.7
SFPQP23246 HNRNPF-202ENST00000356053 2670 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.062e-7■■■■□ 22.7
SFPQP23246 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC31.9■■■□□ 2.71e-6■■■■□ 22.6
SFPQP23246 C7orf50-208ENST00000491163 621 ntAPPRIS ALT2 TSL 322.26■■□□□ 1.151e-6■■■■□ 22.6
SFPQP23246 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.031e-6■■■■□ 22.6
SFPQP23246 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.6■□□□□ 0.891e-6■■■■□ 22.6
SFPQP23246 C7orf50-207ENST00000488073 853 ntTSL 520.2■□□□□ 0.821e-6■■■■□ 22.6
SFPQP23246 NEU4-215ENST00000488997 541 ntTSL 424.42■■□□□ 1.51e-6■■■■□ 22.5
SFPQP23246 NEU4-212ENST00000435894 484 ntTSL 423.65■■□□□ 1.381e-6■■■■□ 22.5
SFPQP23246 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC22.03■■□□□ 1.121e-6■■■■□ 22.5
SFPQP23246 NEU4-207ENST00000420288 845 ntTSL 321.5■■□□□ 1.031e-6■■■■□ 22.5
SFPQP23246 NEU4-216ENST00000494678 491 ntTSL 421.22■□□□□ 0.991e-6■■■■□ 22.5
SFPQP23246 NEU4-213ENST00000435934 451 ntTSL 418.89■□□□□ 0.611e-6■■■■□ 22.5
SFPQP23246 NEU4-209ENST00000426032 676 ntTSL 318.4■□□□□ 0.541e-6■■■■□ 22.5
SFPQP23246 CDYL-207ENST00000472453 1764 ntTSL 1 (best)28.27■■■□□ 2.124e-7■■■■□ 22.5
SFPQP23246 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.794e-7■■■■□ 22.5
SFPQP23246 CDYL-201ENST00000328908 3419 ntTSL 1 (best) BASIC11.53□□□□□ -0.564e-7■■■■□ 22.5
SFPQP23246 CDYL-208ENST00000483019 773 ntTSL 210.87□□□□□ -0.674e-7■■■■□ 22.5
SFPQP23246 CDYL-204ENST00000440139 690 ntTSL 39.29□□□□□ -0.924e-7■■■■□ 22.5
SFPQP23246 CDYL-209ENST00000491864 614 ntTSL 57.31□□□□□ -1.244e-7■■■■□ 22.5
SFPQP23246 LAMA5-202ENST00000370677 1674 ntTSL 221.66■■□□□ 1.064e-8■■■■□ 22.5
SFPQP23246 LAMA5-201ENST00000252999 11426 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.274e-8■■■■□ 22.5
SFPQP23246 EIF4A1-216ENST00000580888 710 ntTSL 219.65■□□□□ 0.746e-7■■■■□ 22.5
SFPQP23246 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.93■□□□□ 0.626e-7■■■■□ 22.5
SFPQP23246 EIF4A1-208ENST00000578476 573 ntTSL 218.36■□□□□ 0.536e-7■■■■□ 22.5
SFPQP23246 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.386e-7■■■■□ 22.5
SFPQP23246 EIF4A1-235ENST00000584860 1109 ntTSL 315.2■□□□□ 0.026e-7■■■■□ 22.5
SFPQP23246 EIF4A1-214ENST00000580461 909 ntTSL 214.28□□□□□ -0.126e-7■■■■□ 22.5
SFPQP23246 EIF4A1-213ENST00000579139 568 ntTSL 413□□□□□ -0.336e-7■■■■□ 22.5
SFPQP23246 EIF4A1-236ENST00000584901 1021 ntTSL 212.9□□□□□ -0.346e-7■■■■□ 22.5
SFPQP23246 EIF4A1-226ENST00000582848 591 ntTSL 312.9□□□□□ -0.346e-7■■■■□ 22.5
SFPQP23246 AC016876.2-201ENST00000581621 4554 ntTSL 2 BASIC12.82□□□□□ -0.366e-7■■■■□ 22.5
SFPQP23246 EIF4A1-218ENST00000581544 1444 ntTSL 212.54□□□□□ -0.46e-7■■■■□ 22.5
SFPQP23246 SENP3-EIF4A1-201ENST00000614237 3519 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.436e-7■■■■□ 22.5
SFPQP23246 EIF4A1-225ENST00000582746 1645 ntTSL 5 BASIC12.16□□□□□ -0.466e-7■■■■□ 22.5
SFPQP23246 EIF4A1-223ENST00000582169 552 ntTSL 411.88□□□□□ -0.516e-7■■■■□ 22.5
SFPQP23246 EIF4A1-229ENST00000583802 563 ntTSL 411.81□□□□□ -0.526e-7■■■■□ 22.5
SFPQP23246 EIF4A1-215ENST00000580886 562 ntTSL 210.96□□□□□ -0.656e-7■■■■□ 22.5
SFPQP23246 EIF4A1-231ENST00000584054 716 ntTSL 210.96□□□□□ -0.656e-7■■■■□ 22.5
SFPQP23246 EIF4A1-233ENST00000584784 818 ntTSL 510.63□□□□□ -0.716e-7■■■■□ 22.5
Retrieved 100 of 4,991 protein–RNA pairs in 86.7 ms