Protein–RNA interactions for Protein: O76070

SNCG, Gamma-synuclein, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCGO76070 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNCGO76070 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SNCGO76070 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC17.4■□□□□ 0.38
SNCGO76070 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC17.4■□□□□ 0.38
SNCGO76070 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNCGO76070 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNCGO76070 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SNCGO76070 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
SNCGO76070 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNCGO76070 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNCGO76070 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
SNCGO76070 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNCGO76070 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNCGO76070 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SNCGO76070 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNCGO76070 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNCGO76070 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SNCGO76070 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNCGO76070 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC17.37■□□□□ 0.37
SNCGO76070 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNCGO76070 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
SNCGO76070 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SNCGO76070 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNCGO76070 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
SNCGO76070 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
SNCGO76070 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SNCGO76070 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC17.35■□□□□ 0.37
SNCGO76070 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNCGO76070 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNCGO76070 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNCGO76070 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SNCGO76070 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SNCGO76070 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC17.34■□□□□ 0.37
SNCGO76070 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC17.34■□□□□ 0.37
SNCGO76070 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNCGO76070 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SNCGO76070 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
SNCGO76070 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
SNCGO76070 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC17.33■□□□□ 0.37
SNCGO76070 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SNCGO76070 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC17.33■□□□□ 0.36
SNCGO76070 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SNCGO76070 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SNCGO76070 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SNCGO76070 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SNCGO76070 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SNCGO76070 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.32■□□□□ 0.36
SNCGO76070 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNCGO76070 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNCGO76070 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNCGO76070 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNCGO76070 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SNCGO76070 AC120057.4-201ENST00000624722 1615 ntBASIC17.32■□□□□ 0.36
SNCGO76070 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
SNCGO76070 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC17.31■□□□□ 0.36
SNCGO76070 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNCGO76070 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC17.31■□□□□ 0.36
SNCGO76070 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNCGO76070 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNCGO76070 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SNCGO76070 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNCGO76070 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SNCGO76070 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNCGO76070 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
SNCGO76070 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNCGO76070 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SNCGO76070 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNCGO76070 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SNCGO76070 AC142086.6-201ENST00000621154 1765 ntBASIC17.3■□□□□ 0.36
SNCGO76070 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC17.29■□□□□ 0.36
SNCGO76070 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
SNCGO76070 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNCGO76070 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNCGO76070 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNCGO76070 PKD1P6-201ENST00000343738 4769 ntBASIC17.28■□□□□ 0.36
SNCGO76070 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
SNCGO76070 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNCGO76070 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNCGO76070 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
SNCGO76070 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SNCGO76070 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SNCGO76070 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
SNCGO76070 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
SNCGO76070 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNCGO76070 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC17.26■□□□□ 0.35
SNCGO76070 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNCGO76070 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
SNCGO76070 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNCGO76070 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNCGO76070 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC17.25■□□□□ 0.35
SNCGO76070 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC17.25■□□□□ 0.35
SNCGO76070 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNCGO76070 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNCGO76070 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
SNCGO76070 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNCGO76070 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNCGO76070 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC17.24■□□□□ 0.35
SNCGO76070 AC138932.1-201ENST00000534164 6830 ntBASIC17.24■□□□□ 0.35
SNCGO76070 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SNCGO76070 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms