Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDE6DO43924 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC19.89■□□□□ 0.77
PDE6DO43924 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC19.88■□□□□ 0.77
PDE6DO43924 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDE6DO43924 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDE6DO43924 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
PDE6DO43924 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC19.88■□□□□ 0.77
PDE6DO43924 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDE6DO43924 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PDE6DO43924 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDE6DO43924 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDE6DO43924 LINC01003-201ENST00000564834 1764 ntBASIC19.87■□□□□ 0.77
PDE6DO43924 PKM-204ENST00000449901 2526 ntTSL 2 BASIC19.86■□□□□ 0.77
PDE6DO43924 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PDE6DO43924 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDE6DO43924 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PDE6DO43924 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDE6DO43924 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDE6DO43924 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDE6DO43924 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC19.86■□□□□ 0.77
PDE6DO43924 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PDE6DO43924 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PDE6DO43924 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
PDE6DO43924 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PDE6DO43924 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
PDE6DO43924 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDE6DO43924 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PDE6DO43924 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PDE6DO43924 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PDE6DO43924 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDE6DO43924 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC19.82■□□□□ 0.76
PDE6DO43924 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDE6DO43924 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
PDE6DO43924 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
PDE6DO43924 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC19.81■□□□□ 0.76
PDE6DO43924 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDE6DO43924 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC19.81■□□□□ 0.76
PDE6DO43924 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDE6DO43924 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
PDE6DO43924 AP004833.2-201ENST00000532228 1454 ntBASIC19.8■□□□□ 0.76
PDE6DO43924 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PDE6DO43924 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDE6DO43924 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
PDE6DO43924 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC19.8■□□□□ 0.76
PDE6DO43924 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PDE6DO43924 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDE6DO43924 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDE6DO43924 EBPL-203ENST00000378270 579 ntTSL 2 BASIC19.79■□□□□ 0.76
PDE6DO43924 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC19.79■□□□□ 0.76
PDE6DO43924 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDE6DO43924 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PDE6DO43924 AC091060.1-201ENST00000623524 1766 ntBASIC19.78■□□□□ 0.76
PDE6DO43924 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PDE6DO43924 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC19.77■□□□□ 0.76
PDE6DO43924 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
PDE6DO43924 AC010864.1-201ENST00000609407 1511 ntBASIC19.76■□□□□ 0.75
PDE6DO43924 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDE6DO43924 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDE6DO43924 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDE6DO43924 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC19.76■□□□□ 0.75
PDE6DO43924 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC19.76■□□□□ 0.75
PDE6DO43924 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
PDE6DO43924 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDE6DO43924 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
PDE6DO43924 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDE6DO43924 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDE6DO43924 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC19.74■□□□□ 0.75
PDE6DO43924 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC19.74■□□□□ 0.75
PDE6DO43924 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PDE6DO43924 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC19.74■□□□□ 0.75
PDE6DO43924 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDE6DO43924 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
PDE6DO43924 SNAI3-AS1-204ENST00000567997 2048 ntBASIC19.73■□□□□ 0.75
PDE6DO43924 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC19.73■□□□□ 0.75
PDE6DO43924 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
PDE6DO43924 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PDE6DO43924 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
PDE6DO43924 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PDE6DO43924 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
PDE6DO43924 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC19.71■□□□□ 0.75
PDE6DO43924 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDE6DO43924 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
PDE6DO43924 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
PDE6DO43924 AC020928.2-201ENST00000588717 2197 ntBASIC19.71■□□□□ 0.75
PDE6DO43924 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDE6DO43924 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC19.71■□□□□ 0.75
PDE6DO43924 AC145676.1-201ENST00000514988 2004 ntBASIC19.71■□□□□ 0.75
PDE6DO43924 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC19.71■□□□□ 0.75
PDE6DO43924 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDE6DO43924 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDE6DO43924 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PDE6DO43924 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDE6DO43924 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC19.7■□□□□ 0.74
PDE6DO43924 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC19.7■□□□□ 0.74
PDE6DO43924 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDE6DO43924 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
PDE6DO43924 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDE6DO43924 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDE6DO43924 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
PDE6DO43924 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms