Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.73
SRGAP3O43295 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC32.07■■■□□ 2.72
SRGAP3O43295 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
SRGAP3O43295 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
SRGAP3O43295 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC32.06■■■□□ 2.72
SRGAP3O43295 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC32.06■■■□□ 2.72
SRGAP3O43295 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC32.06■■■□□ 2.72
SRGAP3O43295 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC32.05■■■□□ 2.72
SRGAP3O43295 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC32.04■■■□□ 2.72
SRGAP3O43295 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
SRGAP3O43295 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC32.03■■■□□ 2.72
SRGAP3O43295 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
SRGAP3O43295 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC32.02■■■□□ 2.72
SRGAP3O43295 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC32.02■■■□□ 2.72
SRGAP3O43295 RNF166-209ENST00000567844 633 ntTSL 5 BASIC32.02■■■□□ 2.72
SRGAP3O43295 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC32.02■■■□□ 2.72
SRGAP3O43295 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC32.01■■■□□ 2.72
SRGAP3O43295 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC32.01■■■□□ 2.72
SRGAP3O43295 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC32.01■■■□□ 2.71
SRGAP3O43295 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC32.01■■■□□ 2.71
SRGAP3O43295 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC32.01■■■□□ 2.71
SRGAP3O43295 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
SRGAP3O43295 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
SRGAP3O43295 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC32■■■□□ 2.71
SRGAP3O43295 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC32■■■□□ 2.71
SRGAP3O43295 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC32■■■□□ 2.71
SRGAP3O43295 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
SRGAP3O43295 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC31.99■■■□□ 2.71
SRGAP3O43295 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC31.99■■■□□ 2.71
SRGAP3O43295 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
SRGAP3O43295 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC31.98■■■□□ 2.71
SRGAP3O43295 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC31.98■■■□□ 2.71
SRGAP3O43295 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC31.98■■■□□ 2.71
SRGAP3O43295 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC31.98■■■□□ 2.71
SRGAP3O43295 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC31.97■■■□□ 2.71
SRGAP3O43295 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
SRGAP3O43295 DUX4L13-201ENST00000554103 1267 ntBASIC31.97■■■□□ 2.71
SRGAP3O43295 DUX4L15-201ENST00000611059 1267 ntBASIC31.97■■■□□ 2.71
SRGAP3O43295 DUX4L23-201ENST00000615195 1269 ntBASIC31.97■■■□□ 2.71
SRGAP3O43295 DUX4L24-201ENST00000617576 1269 ntBASIC31.97■■■□□ 2.71
SRGAP3O43295 DUX4L22-201ENST00000618238 1269 ntBASIC31.97■■■□□ 2.71
SRGAP3O43295 DUX4L20-201ENST00000619712 1269 ntBASIC31.97■■■□□ 2.71
SRGAP3O43295 DUX4L21-201ENST00000622058 1269 ntBASIC31.97■■■□□ 2.71
SRGAP3O43295 DUX4L10-201ENST00000622460 1267 ntBASIC31.97■■■□□ 2.71
SRGAP3O43295 DUX4L25-201ENST00000624915 1269 ntBASIC31.97■■■□□ 2.71
SRGAP3O43295 CHML-204ENST00000638121 920 ntTSL 2 BASIC31.97■■■□□ 2.71
SRGAP3O43295 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC31.97■■■□□ 2.71
SRGAP3O43295 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
SRGAP3O43295 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
SRGAP3O43295 AC100797.4-201ENST00000631653 1827 ntBASIC31.96■■■□□ 2.71
SRGAP3O43295 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC31.95■■■□□ 2.71
SRGAP3O43295 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC31.95■■■□□ 2.71
SRGAP3O43295 MEST-211ENST00000437945 1455 ntTSL 5 BASIC31.95■■■□□ 2.7
SRGAP3O43295 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
SRGAP3O43295 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC31.94■■■□□ 2.7
SRGAP3O43295 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
SRGAP3O43295 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC31.94■■■□□ 2.7
SRGAP3O43295 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC31.93■■■□□ 2.7
SRGAP3O43295 CR559946.2-201ENST00000623684 991 ntBASIC31.93■■■□□ 2.7
SRGAP3O43295 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC31.93■■■□□ 2.7
SRGAP3O43295 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC31.93■■■□□ 2.7
SRGAP3O43295 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
SRGAP3O43295 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
SRGAP3O43295 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC31.92■■■□□ 2.7
SRGAP3O43295 MACF1-219ENST00000484793 834 ntTSL 2 BASIC31.92■■■□□ 2.7
SRGAP3O43295 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC31.91■■■□□ 2.7
SRGAP3O43295 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
SRGAP3O43295 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC31.91■■■□□ 2.7
SRGAP3O43295 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC31.91■■■□□ 2.7
SRGAP3O43295 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC31.9■■■□□ 2.7
SRGAP3O43295 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC31.9■■■□□ 2.7
SRGAP3O43295 MIR3648-2-201ENST00000581792 180 ntBASIC31.9■■■□□ 2.7
SRGAP3O43295 MIR3648-1-201ENST00000615959 180 ntBASIC31.9■■■□□ 2.7
SRGAP3O43295 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
SRGAP3O43295 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC31.89■■■□□ 2.7
SRGAP3O43295 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
SRGAP3O43295 AGPS-202ENST00000409888 815 ntTSL 4 BASIC31.89■■■□□ 2.7
SRGAP3O43295 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC31.89■■■□□ 2.7
SRGAP3O43295 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC31.89■■■□□ 2.7
SRGAP3O43295 GDI1-215ENST00000630693 786 ntTSL 4 BASIC31.89■■■□□ 2.7
SRGAP3O43295 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
SRGAP3O43295 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
SRGAP3O43295 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
SRGAP3O43295 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
SRGAP3O43295 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
SRGAP3O43295 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC31.86■■■□□ 2.69
SRGAP3O43295 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC31.86■■■□□ 2.69
SRGAP3O43295 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC31.85■■■□□ 2.69
SRGAP3O43295 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
SRGAP3O43295 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC31.85■■■□□ 2.69
SRGAP3O43295 AC016575.1-201ENST00000607026 382 ntBASIC31.85■■■□□ 2.69
SRGAP3O43295 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
SRGAP3O43295 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
SRGAP3O43295 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC31.83■■■□□ 2.69
SRGAP3O43295 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
SRGAP3O43295 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC31.82■■■□□ 2.68
SRGAP3O43295 HES6-205ENST00000409356 528 ntTSL 2 BASIC31.81■■■□□ 2.68
SRGAP3O43295 AC110285.7-201ENST00000624417 1536 ntBASIC31.8■■■□□ 2.68
SRGAP3O43295 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
SRGAP3O43295 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC31.79■■■□□ 2.68
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms