Protein–RNA interactions for Protein: O14815

CAPN9, Calpain-9, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9O14815 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC26.98■■□□□ 1.91
CAPN9O14815 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC26.98■■□□□ 1.91
CAPN9O14815 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC26.98■■□□□ 1.91
CAPN9O14815 AC139426.1-201ENST00000568218 2529 ntBASIC26.97■■□□□ 1.91
CAPN9O14815 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC26.97■■□□□ 1.91
CAPN9O14815 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC26.96■■□□□ 1.91
CAPN9O14815 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
CAPN9O14815 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC26.96■■□□□ 1.91
CAPN9O14815 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC26.95■■□□□ 1.91
CAPN9O14815 AC135983.2-203ENST00000454486 1613 ntBASIC26.95■■□□□ 1.91
CAPN9O14815 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC26.94■■□□□ 1.9
CAPN9O14815 AP004833.2-201ENST00000532228 1454 ntBASIC26.94■■□□□ 1.9
CAPN9O14815 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC26.94■■□□□ 1.9
CAPN9O14815 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
CAPN9O14815 LINC01971-201ENST00000617888 1048 ntBASIC26.92■■□□□ 1.9
CAPN9O14815 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC26.92■■□□□ 1.9
CAPN9O14815 WHAMMP2-203ENST00000563942 1603 ntBASIC26.91■■□□□ 1.9
CAPN9O14815 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC26.91■■□□□ 1.9
CAPN9O14815 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CAPN9O14815 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
CAPN9O14815 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CAPN9O14815 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC26.9■■□□□ 1.9
CAPN9O14815 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CAPN9O14815 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
CAPN9O14815 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
CAPN9O14815 MIR7108-201ENST00000614319 87 ntBASIC26.89■■□□□ 1.9
CAPN9O14815 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
CAPN9O14815 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC26.89■■□□□ 1.89
CAPN9O14815 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CAPN9O14815 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CAPN9O14815 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
CAPN9O14815 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC26.88■■□□□ 1.89
CAPN9O14815 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC26.88■■□□□ 1.89
CAPN9O14815 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CAPN9O14815 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC26.87■■□□□ 1.89
CAPN9O14815 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
CAPN9O14815 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC26.86■■□□□ 1.89
CAPN9O14815 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CAPN9O14815 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CAPN9O14815 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC26.86■■□□□ 1.89
CAPN9O14815 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC26.86■■□□□ 1.89
CAPN9O14815 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
CAPN9O14815 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CAPN9O14815 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC26.85■■□□□ 1.89
CAPN9O14815 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC26.85■■□□□ 1.89
CAPN9O14815 SHF-206ENST00000560471 2499 ntTSL 5 BASIC26.85■■□□□ 1.89
CAPN9O14815 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CAPN9O14815 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC26.84■■□□□ 1.89
CAPN9O14815 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC26.84■■□□□ 1.89
CAPN9O14815 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CAPN9O14815 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC26.83■■□□□ 1.89
CAPN9O14815 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC26.83■■□□□ 1.89
CAPN9O14815 DUX4L11-201ENST00000611504 1267 ntBASIC26.83■■□□□ 1.89
CAPN9O14815 DUX4L12-201ENST00000614593 1267 ntBASIC26.83■■□□□ 1.89
CAPN9O14815 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC26.83■■□□□ 1.89
CAPN9O14815 DUX4L14-201ENST00000621227 1267 ntBASIC26.83■■□□□ 1.89
CAPN9O14815 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC26.83■■□□□ 1.89
CAPN9O14815 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC26.83■■□□□ 1.89
CAPN9O14815 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.88
CAPN9O14815 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC26.82■■□□□ 1.88
CAPN9O14815 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC26.82■■□□□ 1.88
CAPN9O14815 MEST-211ENST00000437945 1455 ntTSL 5 BASIC26.82■■□□□ 1.88
CAPN9O14815 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC26.82■■□□□ 1.88
CAPN9O14815 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC26.81■■□□□ 1.88
CAPN9O14815 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC26.81■■□□□ 1.88
CAPN9O14815 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC26.81■■□□□ 1.88
CAPN9O14815 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC26.8■■□□□ 1.88
CAPN9O14815 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
CAPN9O14815 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC26.8■■□□□ 1.88
CAPN9O14815 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC26.8■■□□□ 1.88
CAPN9O14815 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
CAPN9O14815 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
CAPN9O14815 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC26.79■■□□□ 1.88
CAPN9O14815 AC100797.4-201ENST00000631653 1827 ntBASIC26.79■■□□□ 1.88
CAPN9O14815 PVT1-219ENST00000523427 938 ntTSL 3 BASIC26.78■■□□□ 1.88
CAPN9O14815 RNF166-209ENST00000567844 633 ntTSL 5 BASIC26.78■■□□□ 1.88
CAPN9O14815 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC26.78■■□□□ 1.88
CAPN9O14815 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
CAPN9O14815 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC26.78■■□□□ 1.88
CAPN9O14815 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC26.77■■□□□ 1.88
CAPN9O14815 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC26.77■■□□□ 1.88
CAPN9O14815 CHML-204ENST00000638121 920 ntTSL 2 BASIC26.77■■□□□ 1.88
CAPN9O14815 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC26.76■■□□□ 1.87
CAPN9O14815 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
CAPN9O14815 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC26.76■■□□□ 1.87
CAPN9O14815 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
CAPN9O14815 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC26.75■■□□□ 1.87
CAPN9O14815 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC26.75■■□□□ 1.87
CAPN9O14815 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC26.75■■□□□ 1.87
CAPN9O14815 DUX4L13-201ENST00000554103 1267 ntBASIC26.75■■□□□ 1.87
CAPN9O14815 DUX4L15-201ENST00000611059 1267 ntBASIC26.75■■□□□ 1.87
CAPN9O14815 DUX4L23-201ENST00000615195 1269 ntBASIC26.75■■□□□ 1.87
CAPN9O14815 DUX4L24-201ENST00000617576 1269 ntBASIC26.75■■□□□ 1.87
CAPN9O14815 DUX4L22-201ENST00000618238 1269 ntBASIC26.75■■□□□ 1.87
CAPN9O14815 DUX4L20-201ENST00000619712 1269 ntBASIC26.75■■□□□ 1.87
CAPN9O14815 DUX4L21-201ENST00000622058 1269 ntBASIC26.75■■□□□ 1.87
CAPN9O14815 DUX4L10-201ENST00000622460 1267 ntBASIC26.75■■□□□ 1.87
CAPN9O14815 DUX4L25-201ENST00000624915 1269 ntBASIC26.75■■□□□ 1.87
CAPN9O14815 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC26.74■■□□□ 1.87
CAPN9O14815 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms