Protein–RNA interactions for Protein: O14678

ABCD4, ATP-binding cassette sub-family D member 4, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4O14678 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC22.51■■□□□ 1.19
ABCD4O14678 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC22.51■■□□□ 1.19
ABCD4O14678 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
ABCD4O14678 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
ABCD4O14678 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
ABCD4O14678 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC22.49■■□□□ 1.19
ABCD4O14678 DUX4L13-201ENST00000554103 1267 ntBASIC22.49■■□□□ 1.19
ABCD4O14678 DUX4L15-201ENST00000611059 1267 ntBASIC22.49■■□□□ 1.19
ABCD4O14678 DUX4L23-201ENST00000615195 1269 ntBASIC22.49■■□□□ 1.19
ABCD4O14678 DUX4L24-201ENST00000617576 1269 ntBASIC22.49■■□□□ 1.19
ABCD4O14678 DUX4L22-201ENST00000618238 1269 ntBASIC22.49■■□□□ 1.19
ABCD4O14678 DUX4L20-201ENST00000619712 1269 ntBASIC22.49■■□□□ 1.19
ABCD4O14678 DUX4L21-201ENST00000622058 1269 ntBASIC22.49■■□□□ 1.19
ABCD4O14678 DUX4L10-201ENST00000622460 1267 ntBASIC22.49■■□□□ 1.19
ABCD4O14678 DUX4L25-201ENST00000624915 1269 ntBASIC22.49■■□□□ 1.19
ABCD4O14678 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
ABCD4O14678 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC22.49■■□□□ 1.19
ABCD4O14678 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC22.49■■□□□ 1.19
ABCD4O14678 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
ABCD4O14678 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
ABCD4O14678 LINC00273-201ENST00000539813 1452 ntBASIC22.48■■□□□ 1.19
ABCD4O14678 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC22.48■■□□□ 1.19
ABCD4O14678 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
ABCD4O14678 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
ABCD4O14678 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
ABCD4O14678 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
ABCD4O14678 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
ABCD4O14678 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
ABCD4O14678 MIR4449-201ENST00000578365 66 ntBASIC22.47■■□□□ 1.19
ABCD4O14678 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC22.47■■□□□ 1.19
ABCD4O14678 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC22.47■■□□□ 1.19
ABCD4O14678 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
ABCD4O14678 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
ABCD4O14678 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
ABCD4O14678 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC22.45■■□□□ 1.18
ABCD4O14678 CHML-204ENST00000638121 920 ntTSL 2 BASIC22.45■■□□□ 1.18
ABCD4O14678 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
ABCD4O14678 AC127502.1-201ENST00000399971 1502 ntBASIC22.45■■□□□ 1.18
ABCD4O14678 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
ABCD4O14678 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC22.44■■□□□ 1.18
ABCD4O14678 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
ABCD4O14678 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
ABCD4O14678 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC22.43■■□□□ 1.18
ABCD4O14678 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
ABCD4O14678 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
ABCD4O14678 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC22.43■■□□□ 1.18
ABCD4O14678 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC22.43■■□□□ 1.18
ABCD4O14678 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
ABCD4O14678 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
ABCD4O14678 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
ABCD4O14678 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC22.42■■□□□ 1.18
ABCD4O14678 HES6-205ENST00000409356 528 ntTSL 2 BASIC22.41■■□□□ 1.18
ABCD4O14678 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
ABCD4O14678 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
ABCD4O14678 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
ABCD4O14678 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
ABCD4O14678 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC22.38■■□□□ 1.17
ABCD4O14678 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
ABCD4O14678 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
ABCD4O14678 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
ABCD4O14678 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
ABCD4O14678 CHST11-202ENST00000546689 756 ntTSL 2 BASIC22.35■■□□□ 1.17
ABCD4O14678 METRNL-202ENST00000570778 967 ntTSL 5 BASIC22.35■■□□□ 1.17
ABCD4O14678 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
ABCD4O14678 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
ABCD4O14678 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
ABCD4O14678 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
ABCD4O14678 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC22.34■■□□□ 1.17
ABCD4O14678 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
ABCD4O14678 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
ABCD4O14678 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
ABCD4O14678 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
ABCD4O14678 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
ABCD4O14678 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
ABCD4O14678 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
ABCD4O14678 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
ABCD4O14678 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
ABCD4O14678 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC22.32■■□□□ 1.16
ABCD4O14678 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC22.32■■□□□ 1.16
ABCD4O14678 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
ABCD4O14678 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC22.32■■□□□ 1.16
ABCD4O14678 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
ABCD4O14678 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
ABCD4O14678 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
ABCD4O14678 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC22.31■■□□□ 1.16
ABCD4O14678 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC22.31■■□□□ 1.16
ABCD4O14678 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
ABCD4O14678 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
ABCD4O14678 AC135983.2-203ENST00000454486 1613 ntBASIC22.3■■□□□ 1.16
ABCD4O14678 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
ABCD4O14678 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC22.3■■□□□ 1.16
ABCD4O14678 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
ABCD4O14678 WHAMMP2-203ENST00000563942 1603 ntBASIC22.29■■□□□ 1.16
ABCD4O14678 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC22.29■■□□□ 1.16
ABCD4O14678 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
ABCD4O14678 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC22.28■■□□□ 1.16
ABCD4O14678 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
ABCD4O14678 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
ABCD4O14678 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
ABCD4O14678 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms