Protein–RNA interactions for Protein: A6NFE2

SMCO2, Single-pass membrane and coiled-coil domain-containing protein 2, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO2A6NFE2 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
SMCO2A6NFE2 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC29.53■■■□□ 2.32
SMCO2A6NFE2 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC29.53■■■□□ 2.32
SMCO2A6NFE2 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC29.53■■■□□ 2.32
SMCO2A6NFE2 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
SMCO2A6NFE2 PVT1-219ENST00000523427 938 ntTSL 3 BASIC29.52■■■□□ 2.32
SMCO2A6NFE2 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC29.52■■■□□ 2.32
SMCO2A6NFE2 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
SMCO2A6NFE2 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC29.52■■■□□ 2.32
SMCO2A6NFE2 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.32
SMCO2A6NFE2 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC29.51■■■□□ 2.31
SMCO2A6NFE2 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC29.51■■■□□ 2.31
SMCO2A6NFE2 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC29.51■■■□□ 2.31
SMCO2A6NFE2 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC29.51■■■□□ 2.31
SMCO2A6NFE2 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
SMCO2A6NFE2 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
SMCO2A6NFE2 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC29.51■■■□□ 2.31
SMCO2A6NFE2 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC29.49■■■□□ 2.31
SMCO2A6NFE2 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC29.49■■■□□ 2.31
SMCO2A6NFE2 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
SMCO2A6NFE2 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
SMCO2A6NFE2 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
SMCO2A6NFE2 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC29.48■■■□□ 2.31
SMCO2A6NFE2 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
SMCO2A6NFE2 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC29.48■■■□□ 2.31
SMCO2A6NFE2 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC29.47■■■□□ 2.31
SMCO2A6NFE2 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC29.47■■■□□ 2.31
SMCO2A6NFE2 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC29.47■■■□□ 2.31
SMCO2A6NFE2 RNF166-209ENST00000567844 633 ntTSL 5 BASIC29.47■■■□□ 2.31
SMCO2A6NFE2 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC29.47■■■□□ 2.31
SMCO2A6NFE2 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
SMCO2A6NFE2 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC29.47■■■□□ 2.31
SMCO2A6NFE2 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC29.46■■■□□ 2.31
SMCO2A6NFE2 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC29.46■■■□□ 2.31
SMCO2A6NFE2 CHML-204ENST00000638121 920 ntTSL 2 BASIC29.46■■■□□ 2.31
SMCO2A6NFE2 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC29.46■■■□□ 2.31
SMCO2A6NFE2 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
SMCO2A6NFE2 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC29.45■■■□□ 2.31
SMCO2A6NFE2 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC29.45■■■□□ 2.31
SMCO2A6NFE2 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC29.45■■■□□ 2.31
SMCO2A6NFE2 MEST-211ENST00000437945 1455 ntTSL 5 BASIC29.45■■■□□ 2.31
SMCO2A6NFE2 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC29.45■■■□□ 2.3
SMCO2A6NFE2 AC100797.4-201ENST00000631653 1827 ntBASIC29.44■■■□□ 2.3
SMCO2A6NFE2 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
SMCO2A6NFE2 DUX4L13-201ENST00000554103 1267 ntBASIC29.44■■■□□ 2.3
SMCO2A6NFE2 DUX4L15-201ENST00000611059 1267 ntBASIC29.44■■■□□ 2.3
SMCO2A6NFE2 DUX4L23-201ENST00000615195 1269 ntBASIC29.44■■■□□ 2.3
SMCO2A6NFE2 DUX4L24-201ENST00000617576 1269 ntBASIC29.44■■■□□ 2.3
SMCO2A6NFE2 DUX4L22-201ENST00000618238 1269 ntBASIC29.44■■■□□ 2.3
SMCO2A6NFE2 DUX4L20-201ENST00000619712 1269 ntBASIC29.44■■■□□ 2.3
SMCO2A6NFE2 DUX4L21-201ENST00000622058 1269 ntBASIC29.44■■■□□ 2.3
SMCO2A6NFE2 DUX4L10-201ENST00000622460 1267 ntBASIC29.44■■■□□ 2.3
SMCO2A6NFE2 DUX4L25-201ENST00000624915 1269 ntBASIC29.44■■■□□ 2.3
SMCO2A6NFE2 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC29.43■■■□□ 2.3
SMCO2A6NFE2 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC29.43■■■□□ 2.3
SMCO2A6NFE2 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
SMCO2A6NFE2 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC29.42■■■□□ 2.3
SMCO2A6NFE2 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC29.42■■■□□ 2.3
SMCO2A6NFE2 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC29.42■■■□□ 2.3
SMCO2A6NFE2 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
SMCO2A6NFE2 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
SMCO2A6NFE2 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
SMCO2A6NFE2 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
SMCO2A6NFE2 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC29.41■■■□□ 2.3
SMCO2A6NFE2 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC29.41■■■□□ 2.3
SMCO2A6NFE2 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC29.4■■■□□ 2.3
SMCO2A6NFE2 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC29.4■■■□□ 2.3
SMCO2A6NFE2 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
SMCO2A6NFE2 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC29.39■■■□□ 2.3
SMCO2A6NFE2 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
SMCO2A6NFE2 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC29.39■■■□□ 2.29
SMCO2A6NFE2 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC29.39■■■□□ 2.29
SMCO2A6NFE2 AGPS-202ENST00000409888 815 ntTSL 4 BASIC29.38■■■□□ 2.29
SMCO2A6NFE2 MACF1-219ENST00000484793 834 ntTSL 2 BASIC29.38■■■□□ 2.29
SMCO2A6NFE2 MIR3648-2-201ENST00000581792 180 ntBASIC29.38■■■□□ 2.29
SMCO2A6NFE2 MIR3648-1-201ENST00000615959 180 ntBASIC29.38■■■□□ 2.29
SMCO2A6NFE2 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
SMCO2A6NFE2 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC29.37■■■□□ 2.29
SMCO2A6NFE2 CR559946.2-201ENST00000623684 991 ntBASIC29.37■■■□□ 2.29
SMCO2A6NFE2 GDI1-215ENST00000630693 786 ntTSL 4 BASIC29.37■■■□□ 2.29
SMCO2A6NFE2 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
SMCO2A6NFE2 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC29.37■■■□□ 2.29
SMCO2A6NFE2 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
SMCO2A6NFE2 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC29.36■■■□□ 2.29
SMCO2A6NFE2 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
SMCO2A6NFE2 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC29.35■■■□□ 2.29
SMCO2A6NFE2 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
SMCO2A6NFE2 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC29.34■■■□□ 2.29
SMCO2A6NFE2 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC29.33■■■□□ 2.29
SMCO2A6NFE2 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC29.32■■■□□ 2.28
SMCO2A6NFE2 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
SMCO2A6NFE2 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC29.32■■■□□ 2.28
SMCO2A6NFE2 AC016575.1-201ENST00000607026 382 ntBASIC29.32■■■□□ 2.28
SMCO2A6NFE2 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
SMCO2A6NFE2 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
SMCO2A6NFE2 AC110285.7-201ENST00000624417 1536 ntBASIC29.3■■■□□ 2.28
SMCO2A6NFE2 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
SMCO2A6NFE2 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC29.3■■■□□ 2.28
SMCO2A6NFE2 HES6-205ENST00000409356 528 ntTSL 2 BASIC29.3■■■□□ 2.28
SMCO2A6NFE2 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC29.3■■■□□ 2.28
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms