Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRAV2A0A0B4J234 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC19.27■□□□□ 0.68
TRAV2A0A0B4J234 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC19.27■□□□□ 0.68
TRAV2A0A0B4J234 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
TRAV2A0A0B4J234 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
TRAV2A0A0B4J234 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC19.26■□□□□ 0.67
TRAV2A0A0B4J234 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRAV2A0A0B4J234 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC19.26■□□□□ 0.67
TRAV2A0A0B4J234 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC19.26■□□□□ 0.67
TRAV2A0A0B4J234 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRAV2A0A0B4J234 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
TRAV2A0A0B4J234 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
TRAV2A0A0B4J234 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV2A0A0B4J234 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC19.25■□□□□ 0.67
TRAV2A0A0B4J234 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV2A0A0B4J234 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC19.25■□□□□ 0.67
TRAV2A0A0B4J234 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV2A0A0B4J234 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC19.25■□□□□ 0.67
TRAV2A0A0B4J234 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV2A0A0B4J234 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
TRAV2A0A0B4J234 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV2A0A0B4J234 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV2A0A0B4J234 HGH1-207ENST00000628266 258 ntTSL 5 BASIC19.24■□□□□ 0.67
TRAV2A0A0B4J234 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
TRAV2A0A0B4J234 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC19.24■□□□□ 0.67
TRAV2A0A0B4J234 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC19.24■□□□□ 0.67
TRAV2A0A0B4J234 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC19.24■□□□□ 0.67
TRAV2A0A0B4J234 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
TRAV2A0A0B4J234 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAV2A0A0B4J234 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAV2A0A0B4J234 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAV2A0A0B4J234 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC19.23■□□□□ 0.67
TRAV2A0A0B4J234 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV2A0A0B4J234 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV2A0A0B4J234 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
TRAV2A0A0B4J234 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC19.22■□□□□ 0.67
TRAV2A0A0B4J234 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV2A0A0B4J234 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC19.22■□□□□ 0.67
TRAV2A0A0B4J234 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV2A0A0B4J234 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV2A0A0B4J234 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV2A0A0B4J234 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV2A0A0B4J234 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV2A0A0B4J234 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC19.21■□□□□ 0.67
TRAV2A0A0B4J234 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
TRAV2A0A0B4J234 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC19.21■□□□□ 0.67
TRAV2A0A0B4J234 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC19.21■□□□□ 0.67
TRAV2A0A0B4J234 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV2A0A0B4J234 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAV2A0A0B4J234 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC19.2■□□□□ 0.66
TRAV2A0A0B4J234 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
TRAV2A0A0B4J234 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
TRAV2A0A0B4J234 WHAMMP2-203ENST00000563942 1603 ntBASIC19.2■□□□□ 0.66
TRAV2A0A0B4J234 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAV2A0A0B4J234 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAV2A0A0B4J234 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC19.19■□□□□ 0.66
TRAV2A0A0B4J234 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRAV2A0A0B4J234 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC19.19■□□□□ 0.66
TRAV2A0A0B4J234 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRAV2A0A0B4J234 LINC01971-201ENST00000617888 1048 ntBASIC19.18■□□□□ 0.66
TRAV2A0A0B4J234 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
TRAV2A0A0B4J234 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRAV2A0A0B4J234 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TRAV2A0A0B4J234 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC19.17■□□□□ 0.66
TRAV2A0A0B4J234 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRAV2A0A0B4J234 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRAV2A0A0B4J234 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRAV2A0A0B4J234 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV2A0A0B4J234 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV2A0A0B4J234 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC19.16■□□□□ 0.66
TRAV2A0A0B4J234 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC19.16■□□□□ 0.66
TRAV2A0A0B4J234 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV2A0A0B4J234 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC19.15■□□□□ 0.66
TRAV2A0A0B4J234 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC19.15■□□□□ 0.66
TRAV2A0A0B4J234 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV2A0A0B4J234 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
TRAV2A0A0B4J234 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC19.15■□□□□ 0.66
TRAV2A0A0B4J234 PROC-203ENST00000409048 1586 ntTSL 5 BASIC19.15■□□□□ 0.66
TRAV2A0A0B4J234 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRAV2A0A0B4J234 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRAV2A0A0B4J234 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC19.14■□□□□ 0.65
TRAV2A0A0B4J234 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRAV2A0A0B4J234 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV2A0A0B4J234 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV2A0A0B4J234 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV2A0A0B4J234 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
TRAV2A0A0B4J234 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC19.12■□□□□ 0.65
TRAV2A0A0B4J234 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV2A0A0B4J234 AC139426.1-201ENST00000568218 2529 ntBASIC19.11■□□□□ 0.65
TRAV2A0A0B4J234 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC19.11■□□□□ 0.65
TRAV2A0A0B4J234 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV2A0A0B4J234 AC100797.4-201ENST00000631653 1827 ntBASIC19.11■□□□□ 0.65
TRAV2A0A0B4J234 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV2A0A0B4J234 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC19.1■□□□□ 0.65
TRAV2A0A0B4J234 ZNRF2P2-203ENST00000454624 420 ntBASIC19.1■□□□□ 0.65
TRAV2A0A0B4J234 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV2A0A0B4J234 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC19.1■□□□□ 0.65
TRAV2A0A0B4J234 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV2A0A0B4J234 AP002414.2-202ENST00000590929 1450 ntBASIC19.09■□□□□ 0.65
TRAV2A0A0B4J234 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms