Protein–RNA interactions for Protein: A0A075B6N4

TRBV25-1, T-cell receptor beta variable 25-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV25-1A0A075B6N4 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC18.27■□□□□ 0.52
TRBV25-1A0A075B6N4 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC18.27■□□□□ 0.52
TRBV25-1A0A075B6N4 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC18.27■□□□□ 0.51
TRBV25-1A0A075B6N4 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
TRBV25-1A0A075B6N4 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRBV25-1A0A075B6N4 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRBV25-1A0A075B6N4 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC18.26■□□□□ 0.51
TRBV25-1A0A075B6N4 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRBV25-1A0A075B6N4 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRBV25-1A0A075B6N4 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRBV25-1A0A075B6N4 SETD8P1-201ENST00000623146 1180 ntBASIC18.25■□□□□ 0.51
TRBV25-1A0A075B6N4 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
TRBV25-1A0A075B6N4 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
TRBV25-1A0A075B6N4 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
TRBV25-1A0A075B6N4 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRBV25-1A0A075B6N4 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRBV25-1A0A075B6N4 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC18.24■□□□□ 0.51
TRBV25-1A0A075B6N4 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRBV25-1A0A075B6N4 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRBV25-1A0A075B6N4 AL449106.1-201ENST00000608517 1980 ntBASIC18.23■□□□□ 0.51
TRBV25-1A0A075B6N4 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRBV25-1A0A075B6N4 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC18.23■□□□□ 0.51
TRBV25-1A0A075B6N4 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRBV25-1A0A075B6N4 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRBV25-1A0A075B6N4 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRBV25-1A0A075B6N4 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRBV25-1A0A075B6N4 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRBV25-1A0A075B6N4 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRBV25-1A0A075B6N4 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
TRBV25-1A0A075B6N4 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC18.21■□□□□ 0.51
TRBV25-1A0A075B6N4 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRBV25-1A0A075B6N4 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC18.21■□□□□ 0.51
TRBV25-1A0A075B6N4 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.5
TRBV25-1A0A075B6N4 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRBV25-1A0A075B6N4 AC010864.1-201ENST00000609407 1511 ntBASIC18.2■□□□□ 0.5
TRBV25-1A0A075B6N4 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRBV25-1A0A075B6N4 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRBV25-1A0A075B6N4 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRBV25-1A0A075B6N4 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRBV25-1A0A075B6N4 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRBV25-1A0A075B6N4 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRBV25-1A0A075B6N4 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC18.19■□□□□ 0.5
TRBV25-1A0A075B6N4 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC18.19■□□□□ 0.5
TRBV25-1A0A075B6N4 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
TRBV25-1A0A075B6N4 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
TRBV25-1A0A075B6N4 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC18.19■□□□□ 0.5
TRBV25-1A0A075B6N4 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRBV25-1A0A075B6N4 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRBV25-1A0A075B6N4 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV25-1A0A075B6N4 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV25-1A0A075B6N4 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV25-1A0A075B6N4 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV25-1A0A075B6N4 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV25-1A0A075B6N4 AL139393.2-201ENST00000608721 2025 ntBASIC18.17■□□□□ 0.5
TRBV25-1A0A075B6N4 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TRBV25-1A0A075B6N4 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV25-1A0A075B6N4 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV25-1A0A075B6N4 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV25-1A0A075B6N4 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV25-1A0A075B6N4 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRBV25-1A0A075B6N4 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRBV25-1A0A075B6N4 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRBV25-1A0A075B6N4 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV25-1A0A075B6N4 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV25-1A0A075B6N4 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV25-1A0A075B6N4 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV25-1A0A075B6N4 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV25-1A0A075B6N4 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC18.15■□□□□ 0.5
TRBV25-1A0A075B6N4 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
TRBV25-1A0A075B6N4 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRBV25-1A0A075B6N4 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRBV25-1A0A075B6N4 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
TRBV25-1A0A075B6N4 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRBV25-1A0A075B6N4 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRBV25-1A0A075B6N4 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
TRBV25-1A0A075B6N4 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC18.13■□□□□ 0.49
TRBV25-1A0A075B6N4 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRBV25-1A0A075B6N4 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRBV25-1A0A075B6N4 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRBV25-1A0A075B6N4 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRBV25-1A0A075B6N4 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRBV25-1A0A075B6N4 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC18.11■□□□□ 0.49
TRBV25-1A0A075B6N4 EBPL-202ENST00000378268 680 ntTSL 3 BASIC18.11■□□□□ 0.49
TRBV25-1A0A075B6N4 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV25-1A0A075B6N4 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC18.11■□□□□ 0.49
TRBV25-1A0A075B6N4 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV25-1A0A075B6N4 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV25-1A0A075B6N4 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV25-1A0A075B6N4 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC18.1■□□□□ 0.49
TRBV25-1A0A075B6N4 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRBV25-1A0A075B6N4 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC18.1■□□□□ 0.49
TRBV25-1A0A075B6N4 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
TRBV25-1A0A075B6N4 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRBV25-1A0A075B6N4 LTK-203ENST00000453182 2412 ntTSL 2 BASIC18.09■□□□□ 0.49
TRBV25-1A0A075B6N4 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC18.09■□□□□ 0.49
TRBV25-1A0A075B6N4 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
TRBV25-1A0A075B6N4 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC18.09■□□□□ 0.49
TRBV25-1A0A075B6N4 DENR-202ENST00000455982 1052 ntTSL 5 BASIC18.09■□□□□ 0.49
TRBV25-1A0A075B6N4 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRBV25-1A0A075B6N4 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms