Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AC084373.1-201ENST00000603311 235 ntBASIC4.4□□□□□ -1.71
RHBDD3Q9Y3P4 IMMP1LP3-201ENST00000604197 224 ntBASIC4.4□□□□□ -1.71
RHBDD3Q9Y3P4 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.4□□□□□ -1.71
RHBDD3Q9Y3P4 RPSAP73-201ENST00000614820 330 ntBASIC4.4□□□□□ -1.71
RHBDD3Q9Y3P4 RMST_5.1-201ENST00000618704 126 ntBASIC4.4□□□□□ -1.71
RHBDD3Q9Y3P4 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.4□□□□□ -1.71
RHBDD3Q9Y3P4 AC015871.5-202ENST00000623252 701 ntBASIC4.4□□□□□ -1.71
RHBDD3Q9Y3P4 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.4□□□□□ -1.71
RHBDD3Q9Y3P4 BMS1P21-201ENST00000634565 365 ntBASIC4.4□□□□□ -1.71
RHBDD3Q9Y3P4 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
RHBDD3Q9Y3P4 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
RHBDD3Q9Y3P4 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.4□□□□□ -1.71
RHBDD3Q9Y3P4 AL731566.1-201ENST00000620490 1937 ntBASIC4.4□□□□□ -1.71
RHBDD3Q9Y3P4 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RHBDD3Q9Y3P4 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
RHBDD3Q9Y3P4 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.4□□□□□ -1.71
RHBDD3Q9Y3P4 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
RHBDD3Q9Y3P4 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RHBDD3Q9Y3P4 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RHBDD3Q9Y3P4 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
RHBDD3Q9Y3P4 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.4□□□□□ -1.71
RHBDD3Q9Y3P4 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.39□□□□□ -1.71
RHBDD3Q9Y3P4 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
RHBDD3Q9Y3P4 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.39□□□□□ -1.71
RHBDD3Q9Y3P4 CASC19-204ENST00000641001 2055 ntBASIC4.39□□□□□ -1.71
RHBDD3Q9Y3P4 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
RHBDD3Q9Y3P4 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.39□□□□□ -1.71
RHBDD3Q9Y3P4 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RHBDD3Q9Y3P4 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.39□□□□□ -1.71
RHBDD3Q9Y3P4 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.39□□□□□ -1.71
RHBDD3Q9Y3P4 AC011155.1-201ENST00000316512 456 ntBASIC4.39□□□□□ -1.71
RHBDD3Q9Y3P4 MRRF-207ENST00000373729 870 ntTSL 3 BASIC4.39□□□□□ -1.71
RHBDD3Q9Y3P4 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RHBDD3Q9Y3P4 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RHBDD3Q9Y3P4 DUTP5-201ENST00000406790 469 ntBASIC4.39□□□□□ -1.71
RHBDD3Q9Y3P4 RNU6-603P-201ENST00000411403 107 ntBASIC4.39□□□□□ -1.71
RHBDD3Q9Y3P4 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.39□□□□□ -1.71
RHBDD3Q9Y3P4 TMBIM7P-201ENST00000418074 855 ntBASIC4.39□□□□□ -1.71
RHBDD3Q9Y3P4 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.39□□□□□ -1.71
RHBDD3Q9Y3P4 GLUD1P9-201ENST00000420997 1173 ntBASIC4.39□□□□□ -1.71
RHBDD3Q9Y3P4 COX6CP13-201ENST00000428703 226 ntBASIC4.39□□□□□ -1.71
RHBDD3Q9Y3P4 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.39□□□□□ -1.71
RHBDD3Q9Y3P4 AC093716.1-201ENST00000435923 377 ntBASIC4.39□□□□□ -1.71
RHBDD3Q9Y3P4 AL357520.1-201ENST00000441557 453 ntBASIC4.39□□□□□ -1.71
RHBDD3Q9Y3P4 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.39□□□□□ -1.71
RHBDD3Q9Y3P4 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.39□□□□□ -1.71
RHBDD3Q9Y3P4 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.39□□□□□ -1.71
RHBDD3Q9Y3P4 RN7SL443P-201ENST00000464331 290 ntBASIC4.39□□□□□ -1.71
RHBDD3Q9Y3P4 AC021205.1-201ENST00000468797 348 ntBASIC4.39□□□□□ -1.71
RHBDD3Q9Y3P4 RPS21P4-201ENST00000487122 248 ntBASIC4.39□□□□□ -1.71
RHBDD3Q9Y3P4 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.39□□□□□ -1.71
RHBDD3Q9Y3P4 RPL7L1P4-201ENST00000513004 707 ntBASIC4.39□□□□□ -1.71
RHBDD3Q9Y3P4 CCNHP1-201ENST00000513311 678 ntBASIC4.39□□□□□ -1.71
RHBDD3Q9Y3P4 ATP5LP3-201ENST00000514223 304 ntBASIC4.39□□□□□ -1.71
RHBDD3Q9Y3P4 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.39□□□□□ -1.71
RHBDD3Q9Y3P4 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.39□□□□□ -1.71
RHBDD3Q9Y3P4 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RHBDD3Q9Y3P4 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC4.39□□□□□ -1.71
RHBDD3Q9Y3P4 AC005868.1-201ENST00000536421 331 ntBASIC4.39□□□□□ -1.71
RHBDD3Q9Y3P4 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.39□□□□□ -1.71
RHBDD3Q9Y3P4 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.39□□□□□ -1.71
RHBDD3Q9Y3P4 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC4.39□□□□□ -1.71
RHBDD3Q9Y3P4 AP000864.1-201ENST00000609424 650 ntBASIC4.39□□□□□ -1.71
RHBDD3Q9Y3P4 AC022106.2-201ENST00000620114 757 ntBASIC4.39□□□□□ -1.71
RHBDD3Q9Y3P4 AP002505.2-201ENST00000623585 696 ntBASIC4.39□□□□□ -1.71
RHBDD3Q9Y3P4 MIR4302-201ENST00000638058 60 ntBASIC4.39□□□□□ -1.71
RHBDD3Q9Y3P4 CASC19-222ENST00000641321 1173 ntBASIC4.39□□□□□ -1.71
RHBDD3Q9Y3P4 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RHBDD3Q9Y3P4 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RHBDD3Q9Y3P4 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
RHBDD3Q9Y3P4 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.39□□□□□ -1.71
RHBDD3Q9Y3P4 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RHBDD3Q9Y3P4 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RHBDD3Q9Y3P4 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
RHBDD3Q9Y3P4 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
RHBDD3Q9Y3P4 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RHBDD3Q9Y3P4 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
RHBDD3Q9Y3P4 AP001642.1-201ENST00000624727 2117 ntBASIC4.39□□□□□ -1.71
RHBDD3Q9Y3P4 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
RHBDD3Q9Y3P4 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
RHBDD3Q9Y3P4 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RHBDD3Q9Y3P4 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
RHBDD3Q9Y3P4 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.38□□□□□ -1.71
RHBDD3Q9Y3P4 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.38□□□□□ -1.71
RHBDD3Q9Y3P4 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
RHBDD3Q9Y3P4 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RHBDD3Q9Y3P4 PANDAR-201ENST00000629595 1506 ntBASIC4.38□□□□□ -1.71
RHBDD3Q9Y3P4 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.38□□□□□ -1.71
RHBDD3Q9Y3P4 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RHBDD3Q9Y3P4 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.38□□□□□ -1.71
RHBDD3Q9Y3P4 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RHBDD3Q9Y3P4 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RHBDD3Q9Y3P4 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC4.38□□□□□ -1.71
RHBDD3Q9Y3P4 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RHBDD3Q9Y3P4 SNORA2.3-201ENST00000383920 135 ntBASIC4.38□□□□□ -1.71
RHBDD3Q9Y3P4 SNORD65-201ENST00000391079 73 ntBASIC4.38□□□□□ -1.71
RHBDD3Q9Y3P4 AL034374.1-201ENST00000406329 351 ntBASIC4.38□□□□□ -1.71
RHBDD3Q9Y3P4 MIR1271-201ENST00000408537 86 ntBASIC4.38□□□□□ -1.71
RHBDD3Q9Y3P4 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
RHBDD3Q9Y3P4 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms