Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 H2AFZP6-201ENST00000444403 394 ntBASIC4.76□□□□□ -1.65
RNF6Q9Y252 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC4.76□□□□□ -1.65
RNF6Q9Y252 AC079168.1-201ENST00000458741 345 ntBASIC4.76□□□□□ -1.65
RNF6Q9Y252 RN7SL189P-201ENST00000468631 289 ntBASIC4.76□□□□□ -1.65
RNF6Q9Y252 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.76□□□□□ -1.65
RNF6Q9Y252 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.76□□□□□ -1.65
RNF6Q9Y252 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.76□□□□□ -1.65
RNF6Q9Y252 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RNF6Q9Y252 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.76□□□□□ -1.65
RNF6Q9Y252 RN7SKP46-201ENST00000515942 234 ntBASIC4.76□□□□□ -1.65
RNF6Q9Y252 RNA5SP228-201ENST00000516232 133 ntBASIC4.76□□□□□ -1.65
RNF6Q9Y252 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.76□□□□□ -1.65
RNF6Q9Y252 AC109635.6-201ENST00000525487 1113 ntBASIC4.76□□□□□ -1.65
RNF6Q9Y252 AP000859.1-201ENST00000525536 307 ntBASIC4.76□□□□□ -1.65
RNF6Q9Y252 AC024940.3-201ENST00000538551 316 ntBASIC4.76□□□□□ -1.65
RNF6Q9Y252 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.76□□□□□ -1.65
RNF6Q9Y252 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC4.76□□□□□ -1.65
RNF6Q9Y252 BNIP3P7-201ENST00000605641 516 ntBASIC4.76□□□□□ -1.65
RNF6Q9Y252 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC4.76□□□□□ -1.65
RNF6Q9Y252 AL122125.1-201ENST00000616999 600 ntBASIC4.76□□□□□ -1.65
RNF6Q9Y252 RMST_5.1-201ENST00000618704 126 ntBASIC4.76□□□□□ -1.65
RNF6Q9Y252 AL133370.2-201ENST00000619934 439 ntBASIC4.76□□□□□ -1.65
RNF6Q9Y252 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.76□□□□□ -1.65
RNF6Q9Y252 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RNF6Q9Y252 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.76□□□□□ -1.65
RNF6Q9Y252 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
RNF6Q9Y252 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RNF6Q9Y252 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RNF6Q9Y252 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
RNF6Q9Y252 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RNF6Q9Y252 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
RNF6Q9Y252 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RNF6Q9Y252 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RNF6Q9Y252 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RNF6Q9Y252 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RNF6Q9Y252 RNU6-819P-201ENST00000364116 107 ntBASIC4.75□□□□□ -1.65
RNF6Q9Y252 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
RNF6Q9Y252 MIR105-1-201ENST00000385222 81 ntBASIC4.75□□□□□ -1.65
RNF6Q9Y252 HSPA8P15-201ENST00000401676 786 ntBASIC4.75□□□□□ -1.65
RNF6Q9Y252 AL607077.1-201ENST00000401718 499 ntBASIC4.75□□□□□ -1.65
RNF6Q9Y252 AL035079.1-201ENST00000405210 287 ntBASIC4.75□□□□□ -1.65
RNF6Q9Y252 DHFRP5-201ENST00000406944 564 ntBASIC4.75□□□□□ -1.65
RNF6Q9Y252 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
RNF6Q9Y252 AC013429.2-201ENST00000418798 781 ntBASIC4.75□□□□□ -1.65
RNF6Q9Y252 MTCYBP7-201ENST00000419540 1134 ntBASIC4.75□□□□□ -1.65
RNF6Q9Y252 OR6C64P-201ENST00000419708 825 ntBASIC4.75□□□□□ -1.65
RNF6Q9Y252 SETP10-201ENST00000424368 814 ntBASIC4.75□□□□□ -1.65
RNF6Q9Y252 NIPA2P1-201ENST00000426223 976 ntBASIC4.75□□□□□ -1.65
RNF6Q9Y252 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.75□□□□□ -1.65
RNF6Q9Y252 BUD31P2-201ENST00000449374 300 ntBASIC4.75□□□□□ -1.65
RNF6Q9Y252 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.75□□□□□ -1.65
RNF6Q9Y252 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.75□□□□□ -1.65
RNF6Q9Y252 NPM1P29-201ENST00000483112 803 ntBASIC4.75□□□□□ -1.65
RNF6Q9Y252 RN7SL423P-201ENST00000486202 304 ntBASIC4.75□□□□□ -1.65
RNF6Q9Y252 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RNF6Q9Y252 RN7SKP147-201ENST00000517154 244 ntBASIC4.75□□□□□ -1.65
RNF6Q9Y252 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC4.75□□□□□ -1.65
RNF6Q9Y252 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC4.75□□□□□ -1.65
RNF6Q9Y252 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
RNF6Q9Y252 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.75□□□□□ -1.65
RNF6Q9Y252 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC4.75□□□□□ -1.65
RNF6Q9Y252 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC4.75□□□□□ -1.65
RNF6Q9Y252 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.75□□□□□ -1.65
RNF6Q9Y252 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.75□□□□□ -1.65
RNF6Q9Y252 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.75□□□□□ -1.65
RNF6Q9Y252 AC099494.2-201ENST00000623371 978 ntBASIC4.75□□□□□ -1.65
RNF6Q9Y252 AL353662.3-201ENST00000625131 237 ntBASIC4.75□□□□□ -1.65
RNF6Q9Y252 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC4.75□□□□□ -1.65
RNF6Q9Y252 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.75□□□□□ -1.65
RNF6Q9Y252 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RNF6Q9Y252 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
RNF6Q9Y252 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RNF6Q9Y252 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.75□□□□□ -1.65
RNF6Q9Y252 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RNF6Q9Y252 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
RNF6Q9Y252 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.74□□□□□ -1.65
RNF6Q9Y252 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
RNF6Q9Y252 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.74□□□□□ -1.65
RNF6Q9Y252 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.74□□□□□ -1.65
RNF6Q9Y252 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
RNF6Q9Y252 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
RNF6Q9Y252 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC4.74□□□□□ -1.65
RNF6Q9Y252 CHMP1B2P-201ENST00000399581 597 ntBASIC4.74□□□□□ -1.65
RNF6Q9Y252 AL390316.1-201ENST00000406279 553 ntBASIC4.74□□□□□ -1.65
RNF6Q9Y252 AL139039.2-201ENST00000407436 479 ntBASIC4.74□□□□□ -1.65
RNF6Q9Y252 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.74□□□□□ -1.65
RNF6Q9Y252 AC009238.2-201ENST00000431026 355 ntBASIC4.74□□□□□ -1.65
RNF6Q9Y252 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
RNF6Q9Y252 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.74□□□□□ -1.65
RNF6Q9Y252 HMGB3P10-201ENST00000434734 572 ntBASIC4.74□□□□□ -1.65
RNF6Q9Y252 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.74□□□□□ -1.65
RNF6Q9Y252 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.74□□□□□ -1.65
RNF6Q9Y252 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.74□□□□□ -1.65
RNF6Q9Y252 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.74□□□□□ -1.65
RNF6Q9Y252 AL356981.1-201ENST00000454879 684 ntBASIC4.74□□□□□ -1.65
RNF6Q9Y252 Z92846.1-201ENST00000456203 268 ntBASIC4.74□□□□□ -1.65
RNF6Q9Y252 AC104629.2-201ENST00000468627 598 ntBASIC4.74□□□□□ -1.65
RNF6Q9Y252 RPL7P40-201ENST00000481703 745 ntBASIC4.74□□□□□ -1.65
RNF6Q9Y252 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
RNF6Q9Y252 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms